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来自大肠杆菌的苯丙氨酸转移核糖核酸的功能突变体。

Functional mutants of phenylalanine transfer RNA from Escherichia coli.

作者信息

Vacher J, Springer M, Buckingham R H

出版信息

EMBO J. 1985 Feb;4(2):509-13. doi: 10.1002/j.1460-2075.1985.tb03657.x.

DOI:10.1002/j.1460-2075.1985.tb03657.x
PMID:3894009
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC554214/
Abstract

The gene pheV from Escherichia coli, coding for tRNAPhe and carried on a plasmid, has been mutagenised with hydroxylamine. Mutants in the structural gene have been identified using two criteria: (i) de-attenuation of beta-galactosidase expression, while under the control of the attenuator region of the pheS,T operon by means of an operon fusion; (ii) loss of ability to complement thermosensitivity of a mutant Phe-tRNA synthetase. Mutants showing de-attenuation were sequenced and two nucleotide changes identified: G44----A44 (found five times) and m7G46----A46 (found once). Sequencing of mutants that lost complementation identified two further tRNA mutants, C2---U2 and G15----A15; the mutant m7G46----A46 was also re-isolated by this criterion. Three of the mutants involve bases implicated in tertiary rather than secondary structure hydrogen bonding. One hypothesis for the mechanism of de-attenuation is that mutant tRNAPhe molecules compete with the wild-type tRNAPhe on the ribosome but are inefficient at some step in the elongation process.

摘要

来自大肠杆菌的编码苯丙氨酸tRNA的pheV基因,携带在一个质粒上,已用羟胺进行诱变。利用两个标准鉴定了结构基因中的突变体:(i)在通过操纵子融合受pheS、T操纵子衰减子区域控制时,β-半乳糖苷酶表达的去衰减;(ii)丧失对突变型苯丙氨酸-tRNA合成酶热敏感性的互补能力。对显示去衰减的突变体进行测序,鉴定出两个核苷酸变化:G44→A44(发现5次)和m7G46→A46(发现1次)。对丧失互补作用的突变体进行测序,又鉴定出另外两个tRNA突变体,C2→U2和G15→A15;突变体m7G46→A46也通过这一标准再次分离得到。其中三个突变体涉及与三级结构而非二级结构氢键有关的碱基。去衰减机制的一种假说是,突变型苯丙氨酸tRNA分子在核糖体上与野生型苯丙氨酸tRNA竞争,但在延伸过程的某个步骤效率低下。

相似文献

1
Functional mutants of phenylalanine transfer RNA from Escherichia coli.来自大肠杆菌的苯丙氨酸转移核糖核酸的功能突变体。
EMBO J. 1985 Feb;4(2):509-13. doi: 10.1002/j.1460-2075.1985.tb03657.x.
2
Mutants of pheV in Escherichia coli affecting control by attenuation of the pheS, T and pheA operons. Two distinct mechanisms for de-attenuation.大肠杆菌中影响苯丙氨酸合成酶(pheS)、T和苯丙氨酸A(pheA)操纵子衰减控制的苯丙氨酸V(pheV)突变体。两种不同的去衰减机制。
J Mol Biol. 1990 Nov 5;216(1):17-24. doi: 10.1016/S0022-2836(05)80057-9.
3
Mutants affecting tRNA(Phe) from Escherichia coli. Studies of the suppression of thermosensitive phenylalanyl-tRNA synthetase.影响大肠杆菌tRNA(苯丙氨酸)的突变体。对温度敏感型苯丙氨酰-tRNA合成酶抑制作用的研究。
Eur J Biochem. 1987 Oct 15;168(2):365-9. doi: 10.1111/j.1432-1033.1987.tb13428.x.
4
Regulation of E.coli phenylalanyl-tRNA synthetase operon in vivo.体内大肠杆菌苯丙氨酰 - tRNA合成酶操纵子的调控
Biochim Biophys Acta. 1984 May 15;782(1):10-7. doi: 10.1016/0167-4781(84)90100-3.
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The tRNA species for redundant genetic codons NNU and NNC. A thought on the absence of phenylalanine tRNA with AAA anticodon in Escherichia coli.冗余遗传密码子NNU和NNC对应的tRNA种类。关于大肠杆菌中不存在带有AAA反密码子的苯丙氨酸tRNA的思考。
J Biol Chem. 1992 Feb 5;267(4):2240-3.
6
Defective regulation of the phenylalanine biosynthetic operon in mutants of the phenylalanyl-tRNA synthetase operon.苯丙氨酰 - tRNA合成酶操纵子突变体中苯丙氨酸生物合成操纵子的调控缺陷。
J Bacteriol. 1987 May;169(5):1949-53. doi: 10.1128/jb.169.5.1949-1953.1987.
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Escherichia coli phenylalanyl-tRNA synthetase operon is controlled by attenuation in vivo.大肠杆菌苯丙氨酰 - tRNA合成酶操纵子在体内受衰减作用调控。
J Mol Biol. 1983 Dec 15;171(3):263-79. doi: 10.1016/0022-2836(83)90093-1.
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Escherichia coli phenylalanyl-tRNA synthetase operon region. Evidence for an attenuation mechanism. Identification of the gene for the ribosomal protein L20.大肠杆菌苯丙氨酰 - tRNA合成酶操纵子区域。衰减机制的证据。核糖体蛋白L20基因的鉴定。
J Mol Biol. 1983 Dec 15;171(3):239-61. doi: 10.1016/0022-2836(83)90092-x.
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Identification and characterization of mutants affecting transcription termination at the threonine operon attenuator.影响苏氨酸操纵子衰减子转录终止的突变体的鉴定与表征。
J Mol Biol. 1985 Jun 25;183(4):529-41. doi: 10.1016/0022-2836(85)90169-x.
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[Binding of the yeast phenylalanine tRNA with Escherichia coli ribosomes. Effect of the removal of a modified base from the 3'-end of the anticodon on codon-anticodon interaction].[酵母苯丙氨酸tRNA与大肠杆菌核糖体的结合。从反密码子3'-末端去除一个修饰碱基对密码子-反密码子相互作用的影响]
Mol Biol (Mosk). 1984 Nov-Dec;18(6):1486-96.

引用本文的文献

1
Biochemical and physical characterization of an unmodified yeast phenylalanine transfer RNA transcribed in vitro.体外转录的未修饰酵母苯丙氨酸转移RNA的生化与物理特性
Proc Natl Acad Sci U S A. 1988 Feb;85(4):1033-7. doi: 10.1073/pnas.85.4.1033.
2
Transfer ribonucleic acid-mediated suppression of termination codons in Escherichia coli.转移核糖核酸介导的大肠杆菌终止密码子抑制作用。
Microbiol Rev. 1988 Sep;52(3):354-74. doi: 10.1128/mr.52.3.354-374.1988.
3
tRNA-tRNA interactions within cellular ribosomes.细胞核糖体中的转运RNA-转运RNA相互作用。
Proc Natl Acad Sci U S A. 1989 Jun;86(12):4397-401. doi: 10.1073/pnas.86.12.4397.
4
Identification of the pheS5 mutation, which causes thermosensitivity of Escherichia coli mutant NP37.导致大肠杆菌突变体NP37产生温度敏感性的pheS5突变的鉴定。
J Bacteriol. 1992 Mar;174(5):1686-9. doi: 10.1128/jb.174.5.1686-1689.1992.

本文引用的文献

1
Compilation of tRNA sequences.转运RNA序列的汇编。
Nucleic Acids Res. 1982 Jan 22;10(2):r1-55.
2
Rate of elongation of polyphenylalanine in vitro.聚苯丙氨酸体外延伸速率。
Eur J Biochem. 1982 Feb;122(1):193-7. doi: 10.1111/j.1432-1033.1982.tb05866.x.
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Attenuation in the control of expression of bacterial operons.细菌操纵子表达调控中的衰减作用。
Nature. 1981 Feb 26;289(5800):751-8. doi: 10.1038/289751a0.
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Induction of mutations in specific genes of bacteriophage T4 using cloned restriction fragments and marker rescue.利用克隆的限制片段和标记拯救技术诱导噬菌体T4特定基因中的突变。
Mol Gen Genet. 1980 Feb;177(3):447-52. doi: 10.1007/BF00271483.
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Is there proofreading during polypeptide synthesis?多肽合成过程中有校对机制吗?
EMBO J. 1982;1(6):741-5. doi: 10.1002/j.1460-2075.1982.tb01240.x.
6
Compilation of tRNA sequences.转运RNA序列的汇编。
Nucleic Acids Res. 1984;12 Suppl(Suppl):r1-57.
7
Regulation of E.coli phenylalanyl-tRNA synthetase operon in vivo.体内大肠杆菌苯丙氨酰 - tRNA合成酶操纵子的调控
Biochim Biophys Acta. 1984 May 15;782(1):10-7. doi: 10.1016/0167-4781(84)90100-3.
8
Optimization of translation accuracy.翻译准确性的优化。
Prog Nucleic Acid Res Mol Biol. 1984;31:191-219. doi: 10.1016/s0079-6603(08)60378-5.
9
Escherichia coli phenylalanyl-tRNA synthetase operon is controlled by attenuation in vivo.大肠杆菌苯丙氨酰 - tRNA合成酶操纵子在体内受衰减作用调控。
J Mol Biol. 1983 Dec 15;171(3):263-79. doi: 10.1016/0022-2836(83)90093-1.
10
Escherichia coli phenylalanyl-tRNA synthetase operon region. Evidence for an attenuation mechanism. Identification of the gene for the ribosomal protein L20.大肠杆菌苯丙氨酰 - tRNA合成酶操纵子区域。衰减机制的证据。核糖体蛋白L20基因的鉴定。
J Mol Biol. 1983 Dec 15;171(3):239-61. doi: 10.1016/0022-2836(83)90092-x.