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用嘌呤霉素的芳基叠氮衍生物对大肠杆菌核糖体大亚基进行光亲和标记位点的定位

Localization of sites of photoaffinity labeling of the large subunit of Escherichia coli ribosomes by arylazide derivative of puromycin.

作者信息

Olson H M, Nicholson A W, Cooperman B S, Glitz D G

出版信息

J Biol Chem. 1985 Aug 25;260(18):10326-31.

PMID:3894368
Abstract

Previous work (Nicholson, A. W., Hall, C. C., Strycharz, W. A., and Cooperman, B. S. (1982) Biochemistry 21, 3797-3808) showed that [3H]p-azidopuromycin photoaffinity labeled 70 S Escherichia coli ribosomes and that photoincorporation into 50 S subunit proteins was in the order L23 greater than L18/22 greater than L15. In the present work we report on immunoelectron microscopic studies of the complexes formed by p-azidopuromycin-modified 50 S subunits with antibodies to the N6,N6-dimethyladenosine moiety of the antibiotic. The p-azidopuromycin-modified 50 S subunits appear to be identical to unmodified control subunits in electron micrographs. Complexes of modified subunits with antibodies to the N6,N6-dimethyladenosine moiety of p-azidopuromycin were visualized in micrographs. Individual subunits with a single bound antibody (monomeric complexes) and pairs of subunits cross-linked by a single antibody (dimeric complexes) were separately evaluated and showed similar results. Two regions of p-azidopuromycin photoincorporation were identified. The primary site, seen in about 75% of the complexes, is between the central protuberance and small projection, on the side away from the L7/L12 arm, in a region thought to contain the peptidyltransferase center. The secondary site, of unknown significance, is at the base of the subunit maximally distant from the arm. These placements are essentially identical to those we observed in analyses of puromycin photoincorporation (Olson, H. M., Grant, P. G., Cooperman, B. S., and Glitz, D. G. (1982) J. Biol. Chem. 257, 2649-2656) and quantitatively similar to evaluations of monomeric puromycin-50 S subunit complexes. The data support the placement of proteins L23, L18/22, and L15 at or near the peptidyltransferase center at the primary site and suggest, in addition, that the secondary site includes a genuine area of puromycin affinity.

摘要

先前的研究工作(Nicholson, A. W., Hall, C. C., Strycharz, W. A., and Cooperman, B. S. (1982) Biochemistry 21, 3797 - 3808)表明,[3H]对叠氮嘌呤霉素进行光亲和标记了70S大肠杆菌核糖体,并且光掺入50S亚基蛋白质的顺序为L23大于L18/22大于L15。在本研究中,我们报道了对由对叠氮嘌呤霉素修饰的50S亚基与针对该抗生素的N6,N6 - 二甲基腺苷部分的抗体形成的复合物进行的免疫电子显微镜研究。在电子显微镜照片中,对叠氮嘌呤霉素修饰的50S亚基看起来与未修饰的对照亚基相同。在显微镜照片中观察到了修饰亚基与针对对叠氮嘌呤霉素的N6,N6 - 二甲基腺苷部分的抗体形成的复合物。分别评估了带有单个结合抗体的单个亚基(单体复合物)和由单个抗体交联的亚基对(二聚体复合物),并显示出相似的结果。确定了对叠氮嘌呤霉素光掺入的两个区域。主要位点见于约75%的复合物中,位于中央突起和小突起之间,在远离L7/L12臂的一侧,在一个被认为包含肽基转移酶中心的区域。次要位点意义不明,位于亚基基部距臂最远的位置。这些位置与我们在嘌呤霉素光掺入分析中观察到的位置基本相同(Olson, H. M., Grant, P. G., Cooperman, B. S., and Glitz, D. G. (1982) J. Biol. Chem. 257, 2649 - 2656),并且在数量上与单体嘌呤霉素 - 50S亚基复合物的评估结果相似。这些数据支持蛋白质L23、L18/22和L15位于主要位点的肽基转移酶中心或其附近,此外还表明次要位点包括一个真正的嘌呤霉素亲和区域。

相似文献

1
Localization of sites of photoaffinity labeling of the large subunit of Escherichia coli ribosomes by arylazide derivative of puromycin.用嘌呤霉素的芳基叠氮衍生物对大肠杆菌核糖体大亚基进行光亲和标记位点的定位
J Biol Chem. 1985 Aug 25;260(18):10326-31.
2
[3H]-p-azidopuromycin photoaffinity labeling of Escherichia coli ribosomes: evidence for site-specific interaction at U-2504 and G-2502 in domain V of 23S ribosomal RNA.大肠杆菌核糖体的[3H]-对叠氮嘌呤霉素光亲和标记:23S核糖体RNA结构域V中U-2504和G-2502位点特异性相互作用的证据
Biochemistry. 1988 May 31;27(11):3983-90. doi: 10.1021/bi00411a014.
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Immunoelectron microscopic localization of puromycin binding on the large subunit of the Escherichia coli ribosome.嘌呤霉素在大肠杆菌核糖体大亚基上结合的免疫电子显微镜定位
J Biol Chem. 1982 Mar 10;257(5):2649-56.
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Photoaffinity labeling of Escherichia coli ribosomes by an aryl azide analogue of puromycin. Evidence for the functional site specificity of labeling.用嘌呤霉素的芳基叠氮类似物对大肠杆菌核糖体进行光亲和标记。标记功能位点特异性的证据。
Biochemistry. 1982 Aug 3;21(16):3809-17. doi: 10.1021/bi00259a014.
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Immunoelectron microscopic localization of the site of photo-induced affinity labeling of the small ribosomal subunit with puromycin.用嘌呤霉素对小核糖体亚基进行光诱导亲和标记位点的免疫电子显微镜定位。
Proc Natl Acad Sci U S A. 1980 Feb;77(2):890-4. doi: 10.1073/pnas.77.2.890.
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Reconstitution of Escherichia coli 50S ribosomal subunits containing puromycin-modified L23: functional consequences.含有嘌呤霉素修饰的L23的大肠杆菌50S核糖体亚基的重组:功能后果
Biochemistry. 1990 Apr 10;29(14):3458-65. doi: 10.1021/bi00466a006.
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Localization of the puromycin binding site on the large ribosomal subunit of Escherichia coli by immunoelectron microscopy.通过免疫电子显微镜对嘌呤霉素在大肠杆菌大核糖体亚基上结合位点的定位
Proc Natl Acad Sci U S A. 1981 Dec;78(12):7276-80. doi: 10.1073/pnas.78.12.7276.
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Puromycin binding to the small subunit of Escherichia coli ribosomes. Localization of the antibiotic in subunits reconstituted with puromycin-modified components.嘌呤霉素与大肠杆菌核糖体小亚基的结合。用嘌呤霉素修饰的成分重构亚基中抗生素的定位。
J Biol Chem. 1983 Sep 25;258(18):11305-12.
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On the structural specificity of puromycin binding to Escherichia coli ribosomes.关于嘌呤霉素与大肠杆菌核糖体结合的结构特异性
Biochemistry. 1985 Apr 23;24(9):2268-74. doi: 10.1021/bi00330a022.
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Reconstitution of Escherichia coli ribosomes containing puromycin-modified S14: functional effects of the photoaffinity labeling of a protein essential for tRNA binding.含有嘌呤霉素修饰的S14的大肠杆菌核糖体的重建:对tRNA结合至关重要的一种蛋白质光亲和标记的功能影响
Biochemistry. 1986 Dec 2;25(24):8002-10. doi: 10.1021/bi00372a032.

引用本文的文献

1
Three-dimensional structure of the large ribosomal subunit from Escherichia coli.来自大肠杆菌的大核糖体亚基的三维结构。
EMBO J. 1987 Apr;6(4):1107-14. doi: 10.1002/j.1460-2075.1987.tb04865.x.
2
Localization of ribosomal protein L27 at the peptidyl transferase centre of the 50 S subunit, as determined by immuno-electron microscopy.通过免疫电子显微镜确定核糖体蛋白L27在50 S亚基肽基转移酶中心的定位。
Mol Gen Genet. 1987 Dec;210(3):498-503. doi: 10.1007/BF00327203.
3
How are tRNAs and mRNA arranged in the ribosome? An attempt to correlate the stereochemistry of the tRNA-mRNA interaction with constraints imposed by the ribosomal topography.
转运RNA(tRNA)和信使RNA(mRNA)在核糖体中是如何排列的?试图将tRNA与mRNA相互作用的立体化学与核糖体结构所施加的限制联系起来。
Nucleic Acids Res. 1992 Jun 11;20(11):2627-37. doi: 10.1093/nar/20.11.2627.