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tRNA 诱导脯氨酸到丝氨酸错译对黑腹果蝇转录组的影响。

Impact of tRNA-induced proline-to-serine mistranslation on the transcriptome of Drosophila melanogaster.

机构信息

Department of Biology, Western University, London, Canada, N6A 5B7.

Department of Genome Sciences, University of Washington, Seattle, WA 98195, USA.

出版信息

G3 (Bethesda). 2024 Sep 4;14(9). doi: 10.1093/g3journal/jkae151.

Abstract

Mistranslation is the misincorporation of an amino acid into a polypeptide. Mistranslation has diverse effects on multicellular eukaryotes and is implicated in several human diseases. In Drosophila melanogaster, a serine transfer RNA (tRNA) that misincorporates serine at proline codons (P→S) affects male and female flies differently. The mechanisms behind this discrepancy are currently unknown. Here, we compare the transcriptional response of male and female flies to P→S mistranslation to identify genes and cellular processes that underlie sex-specific differences. Both males and females downregulate genes associated with various metabolic processes in response to P→S mistranslation. Males downregulate genes associated with extracellular matrix organization and response to negative stimuli such as wounding, whereas females downregulate aerobic respiration and ATP synthesis genes. Both sexes upregulate genes associated with gametogenesis, but females also upregulate cell cycle and DNA repair genes. These observed differences in the transcriptional response of male and female flies to P→S mistranslation have important implications for the sex-specific impact of mistranslation on disease and tRNA therapeutics.

摘要

错译是指将氨基酸错误地掺入多肽中。错译对多细胞真核生物有多种影响,并与几种人类疾病有关。在黑腹果蝇中,一种将丝氨酸错误掺入脯氨酸密码子(P→S)的丝氨酸转移 RNA(tRNA)对雌雄果蝇的影响不同。目前尚不清楚这种差异的背后机制。在这里,我们比较了 P→S 错译对雄性和雌性果蝇的转录反应,以鉴定潜在的性别特异性差异的基因和细胞过程。P→S 错译会导致雄性和雌性果蝇下调与各种代谢过程相关的基因。雄性果蝇下调与细胞外基质组织和对创伤等负面刺激的反应相关的基因,而雌性果蝇下调有氧呼吸和 ATP 合成基因。雌雄果蝇都上调与配子发生相关的基因,但雌性果蝇还上调细胞周期和 DNA 修复基因。这些 P→S 错译对雌雄果蝇转录反应的差异对错译对疾病和 tRNA 治疗的性别特异性影响具有重要意义。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0a7e/11373654/a6f750fb328d/jkae151f1.jpg

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