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基于网络药理学、分子对接和实验验证的改良活络效灵丹抗结直肠癌作用机制

[Mechanism of Modified Huoluo Xiaoling Pills against colorectal cancer based on network pharmacology, molecular docking, and experimental validation].

作者信息

Jiang Wei, Zhao Qiu-Ping, Huang Lin, Jiang Jia-Wang, Li Ming-Li, Chen Xiao-Chun, Xu Yan, Wang Guo-Juan, Deng Lan, Zhang Lei-Chang, Li Zhi-Ming

机构信息

School of Clinical Medicine, Jiangxi University of Chinese Medicine Nanchang 330004, China.

Longhua Hospital, Shanghai University of Traditional Chinese Medicine Shanghai 200032, China.

出版信息

Zhongguo Zhong Yao Za Zhi. 2024 Jul;49(13):3657-3667. doi: 10.19540/j.cnki.cjcmm.20240325.501.

Abstract

This study aims to predict the possible targets and related signaling pathways of Modified Huoluo Xiaoling Pills against colorectal cancer(CRC) by both network pharmacology and molecular docking and verify the mechanism of action by experiments. TCMSP was used to obtain the active ingredients and targets of Modified Huoluo Xiaoling Pills, and GeneCards, DrugBank, OMIM, and TTD were employed to acquire CRC-related targets. Cytoscape software was utilized to construct the drug-active ingredient-target network, and the STRING database was applied to establish the protein-protein interaction(PPI) network. DAVID platform was adopted to investigate the targets in terms of GO function and KEGG pathway enrichment analysis. Molecular docking was performed in AutoDock Vina. HCT 116 cells were intervened by different concentrations of Modified Huoluo Xiaoling Pills-containing serum, and CCK-8 was used to detect the proliferation inhibition of HCT 116 cells in each group. Transwell was employed to show the invasive abi-lity of HCT 116 cells, and Western blot was taken to reveal the expression levels of β-catenin, cyclinD1, c-Myc, as well as epithelial-mesenchymal transition(EMT) marker proteins E-cadherin, N-cadherin, vimentin, MMP2, MMP7, MMP9, and TWIST in HCT 116 cells. The network pharmacological analysis yielded 242 active ingredients of Modified Huoluo Xiaoling Pills, 1 844 CRC targets, and 127 overlapping targets of CRC and Modified Huoluo Xiaoling Pills, and the signaling pathways related to CRC involved PI3K-Akt, TNF, HIF-1, IL-17, Wnt, etc. Molecular docking showed that the key active ingredients had a stable binding conformation with the core proteins. CCK-8 indicated that Modified Huoluo Xiaoling Pills significantly inhibited the proliferation of HCT 116 cells. Transwell assay showed that with increasing concentration of Modified Huoluo Xiaoling Pills containing serum, the invasive ability of HCT 116 cells was more obviously inhibited. The expression of β-catenin, cyclinD1, c-Myc, N-cadherin, vimentin, MMP2, MMP7, MMP9, and TWIST proteins were suppressed, and the expression of E-cadherin was improved by the intervention of drug-containing serum. Thus, it can be seen that Modified Huoluo Xiaoling Pills restrains the proliferation, invasion, and metastasis of CRC cells through multiple components, multiple targets, and multiple pathways, and the mechanism of action may be related to the inhibition of the activation of the Wnt/β-catenin signaling pathway, thereby affecting the occurrence of EMT.

摘要

本研究旨在通过网络药理学和分子对接预测加味活络效灵丹抗结直肠癌(CRC)的潜在靶点及相关信号通路,并通过实验验证其作用机制。利用中药系统药理学数据库与分析平台(TCMSP)获取加味活络效灵丹的活性成分和靶点,借助基因卡片数据库(GeneCards)、药物银行数据库(DrugBank)、在线人类孟德尔遗传数据库(OMIM)和治疗靶点数据库(TTD)获取CRC相关靶点。运用Cytoscape软件构建药物-活性成分-靶点网络,应用STRING数据库建立蛋白质-蛋白质相互作用(PPI)网络。采用DAVID平台对靶点进行基因本体(GO)功能和京都基因与基因组百科全书(KEGG)通路富集分析。使用AutoDock Vina进行分子对接。用不同浓度含加味活络效灵丹血清干预人结肠癌细胞系HCT 116,采用细胞计数试剂盒-8(CCK-8)检测各组HCT 116细胞的增殖抑制情况。采用Transwell实验检测HCT 116细胞的侵袭能力,通过蛋白质免疫印迹法检测HCT 116细胞中β-连环蛋白、细胞周期蛋白D1、c-Myc以及上皮-间质转化(EMT)标志物E-钙黏蛋白、N-钙黏蛋白、波形蛋白、基质金属蛋白酶2(MMP2)、基质金属蛋白酶7(MMP7)、基质金属蛋白酶9(MMP9)和TWIST的表达水平。网络药理学分析得到加味活络效灵丹的242个活性成分、1844个CRC靶点以及127个CRC与加味活络效灵丹的重叠靶点,与CRC相关的信号通路涉及磷脂酰肌醇-3激酶-蛋白激酶B(PI3K-Akt)、肿瘤坏死因子(TNF)、缺氧诱导因子-1(HIF-1)、白细胞介素-17(IL-17)、Wnt等。分子对接表明关键活性成分与核心蛋白具有稳定的结合构象。CCK-8结果显示加味活络效灵丹显著抑制HCT 116细胞增殖。Transwell实验表明,随着含加味活络效灵丹血清浓度的增加,HCT 116细胞的侵袭能力受到更明显抑制。含药血清干预后,β-连环蛋白、细胞周期蛋白D1、c-Myc、N-钙黏蛋白、波形蛋白、MMP2、MMP7、MMP9和TWIST蛋白的表达受到抑制,E-钙黏蛋白的表达升高。由此可见,加味活络效灵丹通过多成分、多靶点、多途径抑制CRC细胞的增殖、侵袭和转移,其作用机制可能与抑制Wnt/β-连环蛋白信号通路的激活从而影响EMT的发生有关。

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