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用于分析植物激酶活性的基于DNA编码探针的检测方法。

DNA-encoded probe-based assay for profiling plant kinase activities.

作者信息

Chien Yuan-Chi, Valencia C Alexander, Lee Han Yong, Yoon Gyeong Mee, Kim Dongwook

机构信息

Department of Botany and Plant Pathology and Center for Plant Biology, Purdue University, West Lafayette, IN 47907, USA.

Interpath Laboratory, Pendleton, OR 97801, USA.

出版信息

PNAS Nexus. 2024 Jul 19;3(7):pgae281. doi: 10.1093/pnasnexus/pgae281. eCollection 2024 Jul.

Abstract

Elucidating kinase-substrate relationships is pivotal for deciphering cellular signaling mechanisms, yet it remains challenging due to the complexity of kinase networks. Herein, we report the development of a versatile DNA-based kinase assay platform for high-throughput profiling of plant protein kinase activities and substrate preferences. Our approach employs DNA-linked peptide substrates, facilitating quantitative and specific kinase activity detection through next-generation DNA sequencing. Leveraging DNA barcodes as quantitative readouts, our approach establishes a high-throughput, sensitive, and specific platform for dissecting kinase-substrate networks in plants, representing a powerful tool for elucidating signaling mechanisms in plants.

摘要

阐明激酶-底物关系对于解读细胞信号传导机制至关重要,但由于激酶网络的复杂性,这仍然具有挑战性。在此,我们报告了一种基于DNA的通用激酶检测平台的开发,用于植物蛋白激酶活性和底物偏好的高通量分析。我们的方法采用DNA连接的肽底物,通过下一代DNA测序促进定量和特异性激酶活性检测。利用DNA条形码作为定量读数,我们的方法建立了一个高通量、灵敏且特异的平台,用于剖析植物中的激酶-底物网络,是阐明植物信号传导机制的有力工具。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0c4a/11263872/af28c695e04f/pgae281f1.jpg

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