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3-取代-2-吲哚酮衍生物的设计、合成、抗癌、抗炎及计算机模拟研究

Design, Synthesis, Anti-Cancer, Anti-Inflammatory and In Silico Studies of 3-Substituted-2-Oxindole Derivatives.

作者信息

Hublikar Mahesh, Kadu Vikas, Edake Nagesh, Raut Dattatraya, Shirame Sachin, Ahmed Mahammad Z, Makam Parameshwar, Ahmad Md Sibgatullah, Meshram Rohan J, Bhosale Raghunath

机构信息

Organic Chemistry Research Laboratory, School of Chemical Sciences, Solapur University, Solapur, Maharashtra, 413255, India.

Department of Pharmacognosy, College of Pharmacy, King Saud University, Riyadh, 11451, Saudi Arabia.

出版信息

Chem Biodivers. 2024 Nov;21(11):e202400844. doi: 10.1002/cbdv.202400844. Epub 2024 Sep 24.

Abstract

This study focuses on the design and synthesis of 3-substituted-2-oxindole derivatives aimed at developing dual-active molecules with anti-cancer and anti-inflammatory properties. The molecules were designed with diverse structural and functional features while adhering to Lipinski, Veber, and Leeson criteria. Physicochemical properties were assessed using SWISSADME to ensure drug-likeness and favourable pharmacokinetics. Multistep synthetic procedures were employed for molecule synthesis. In vitro evaluations confirmed the dual activity of the derivatives, with specific emphasis on the significance of dialkyl aminomethyl substitutions for potency against various cell lines. 4 a exhibited GI value 3.00E against MDA-MB-231, 4 b has shown GI value 2E against MDA-MB-231, 4 c has shown GI value 6E against VERO, 4 d has shown GI value 8E each against both the MDA-MB-231 and MCF-7 and 4 e has shown GI values 2E and 5E each against both the MCF-7 and VERO. The analysis indicates that compounds 3 c (71.19 %), 3 e (66.84 %), and 3 g (63.04 %) exhibited significant anti-inflammatory activity. Additionally, in silico binding free energy analysis and interaction studies revealed significant correlations between in vitro and computational data, identifying compounds 4 d, 4 e, 3 b, 3 i, and 3 e as promising candidates. Key residues such as Glu917, Cys919, Lys920, Glu850, Lys838, and Asp1046 were found to play critical roles in ligand binding and kinase inhibition, providing valuable insights for designing potent VEGFR2 inhibitors. The Quantum Mechanics-based Independent Gradient Model analysis further highlighted the electronic interaction landscape, showing larger attractive peaks and higher electron density gradients for compounds 4 d and 4 e compared to Sunitinib, suggesting stronger and more diverse attractive forces. These findings support the potential of these compounds for further development and optimization in anticancer drug design.

摘要

本研究聚焦于3-取代-2-吲哚酮衍生物的设计与合成,旨在开发具有抗癌和抗炎特性的双活性分子。这些分子在设计时具有多样的结构和功能特征,同时符合Lipinski、Veber和Leeson标准。使用SWISSADME评估物理化学性质,以确保药物相似性和良好的药代动力学。采用多步合成程序进行分子合成。体外评估证实了这些衍生物的双活性,特别强调了二烷基氨基甲基取代对针对各种细胞系的效力的重要性。4 a对MDA-MB-231显示出GI值3.00E,4 b对MDA-MB-231显示出GI值2E,4 c对VERO显示出GI值6E,4 d对MDA-MB-231和MCF-7均显示出GI值8E,4 e对MCF-7和VERO均显示出GI值2E和5E。分析表明,化合物3 c(71.19 %)、3 e(66.84 %)和3 g(63.04 %)表现出显著的抗炎活性。此外,计算机模拟结合自由能分析和相互作用研究揭示了体外和计算数据之间的显著相关性,确定化合物4 d、4 e、3 b、3 i和3 e为有前景的候选物。发现关键残基如Glu917、Cys919、Lys920、Glu850、Lys838和Asp1046在配体结合和激酶抑制中起关键作用,为设计有效的VEGFR2抑制剂提供了有价值的见解。基于量子力学的独立梯度模型分析进一步突出了电子相互作用态势,表明与舒尼替尼相比,化合物4 d和4 e具有更大的吸引峰和更高的电子密度梯度,表明具有更强和更多样化的吸引力。这些发现支持了这些化合物在抗癌药物设计中进一步开发和优化的潜力。

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