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基于质谱分析和人工智能的疟原虫裂殖子胞外囊泡的鉴定,为疫苗开发提供新的候选物。

Mass Spectrometric and Artificial Intelligence-Based Identification of the Secretome of Plasmodium falciparum Merozoites to Provide Novel Candidates for Vaccine Development Pipeline.

机构信息

Special Centre of Molecular Medicine, Jawaharlal Nehru University, New Delhi, India.

Center for Systems Biology and Molecular Medicine, Yenepoya Research Centre, Yenepoya (Deemed to be University), Mangalore, India.

出版信息

Proteomics Clin Appl. 2024 Nov;18(6):e202300115. doi: 10.1002/prca.202300115. Epub 2024 Jul 31.

DOI:10.1002/prca.202300115
PMID:39082488
Abstract

PURPOSE

Merozoites are the only extracellular form of blood stage parasites, making it a worthwhile target. Multiple invasins that are stored in the merozoite apical organelles, are secreted just prior to invasion, and mediates its interaction with RBC. A comprehensive identification of all these secreted invasins is lacking and this study addresses that gap.

EXPERIMENTAL DESIGN

Pf3D7 merozoites were enriched and triggered to discharge apical organelle contents by exposure to ionic conditions mimicking that of blood plasma. The secreted proteins were separated from cellular contents and both the fractions were subjected to proteomic analysis. Also, the identified secreted proteins were subjected to GO, PPI network analysis, and AI-based in silico approach to understand their vaccine candidacy.

RESULTS

A total of 63 proteins were identified in the secretory fraction with membrane and apical organellar localization. This includes various MSPs, micronemal EBAs and rhoptry bulb proteins, which play a crucial role in initial and late merozoite attachment, and majority of them qualified as vaccine candidates.

CONCLUSION AND CLINICAL RELEVANCE

We, for the first time, report the secretory repertoire of merozoite and its status for vaccine candidacy. This information can be utilized to develop better invasion blocking multisubunit vaccines, comprising of immunological epitopes from several secreted invasins.

摘要

目的

裂殖子是血期寄生虫唯一的细胞外形式,因此是一个有价值的靶标。多个储存于裂殖子顶端细胞器中的入侵素,在入侵前被分泌,并介导其与 RBC 的相互作用。缺乏对所有这些分泌入侵素的全面鉴定,本研究旨在填补这一空白。

实验设计

富集 Pf3D7 裂殖子,并通过暴露于模拟血浆离子条件来触发顶端细胞器内容物的排出。将分泌蛋白与细胞内容物分离,并对这两个部分进行蛋白质组学分析。此外,对鉴定出的分泌蛋白进行 GO、PPI 网络分析和基于人工智能的计算方法分析,以了解其疫苗候选性。

结果

在分泌部分共鉴定出 63 种具有膜和顶端细胞器定位的蛋白质。这包括各种 MSPs、微线 EBAs 和棒状体蛋白,它们在初始和晚期裂殖子附着中起着关键作用,其中大多数有资格成为疫苗候选物。

结论和临床相关性

我们首次报道了裂殖子的分泌组及其作为疫苗候选物的状态。这些信息可用于开发更好的入侵阻断多亚单位疫苗,包含来自几种分泌入侵素的免疫表位。

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