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基于网络的药物重定位和基因组分析揭示猴痘病毒的潜在治疗方法。

Network-Based Drug Repurposing and Genomic Analysis to Unveil Potential Therapeutics for Monkeypox Virus.

机构信息

Molecular Diagnostic Laboratory, Johns Hopkins Aramco Healthcare, Dhahran, 31311, Saudi Arabia.

College of Medicine, Alfaisal University, Riyadh, 11533, Saudi Arabia.

出版信息

Chem Biodivers. 2024 Nov;21(11):e202400895. doi: 10.1002/cbdv.202400895. Epub 2024 Oct 9.

Abstract

The emergence of the human monkeypox virus (MPXV) and the lack of effective medications have necessitated the exploration of various strategies to combat its infection. This study employs a network-based approach to drug discovery, utilizing the BLASTn and phylogenetic analysis to compare the MPXV genome with those of 18 related orthopoxviruses, revealing over 75 % genomic similarity. Through a literature review, 160 human-host proteins linked to MPXV and its relatives were identified, leading to the construction of a human-host protein interactome. Analysis of this interactome highlighted 39 central hub proteins, which were then examined for potential drug targets. The process successfully revealed 15 targets already approved for use with medications. Additionally, the functional enrichment analysis provided insights into potential pathways and disorders connected with these targets. Four medications, namely Baricitinib, Infliximab, Adalimumab, and Etanercept, have been identified as potential candidates for repurposing to combat MPXV. In addition, the pharmacophore-based screening identified a molecule that is comparable to Baricitinib and has the potential to be effective against MPXV. The findings of the study suggest that ZINC22060520 is a promising medication for treating MPXV infection and proposes these medications as potential options for additional experimental and clinical assessment in the battle against MPXV.

摘要

人猴痘病毒(MPXV)的出现和缺乏有效的药物治疗手段,促使我们探索各种策略来对抗其感染。本研究采用基于网络的药物发现方法,利用 BLASTn 和系统发育分析将 MPXV 基因组与 18 种相关正痘病毒进行比较,发现其基因组相似度超过 75%。通过文献回顾,确定了 160 个人类宿主蛋白与 MPXV 及其亲缘病毒有关,从而构建了人类宿主蛋白互作网络。对该互作网络的分析突出了 39 个核心枢纽蛋白,然后对这些蛋白进行了药物靶点的潜在评估。该过程成功揭示了 15 个已被批准用于其他药物的靶点。此外,功能富集分析提供了与这些靶点相关的潜在途径和疾病的见解。四种药物,即巴利昔替尼、英夫利昔单抗、阿达木单抗和依那西普,已被确定为重新用于对抗 MPXV 的潜在候选药物。此外,基于药效基团的筛选鉴定出一种与巴利昔替尼相当的分子,具有针对 MPXV 的潜在有效性。研究结果表明,ZINC22060520 是一种有前途的治疗 MPXV 感染的药物,并提出这些药物作为对抗 MPXV 的额外实验和临床评估的潜在选择。

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