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COL15A1的泛癌分析:一种免疫和预后生物标志物

Pan-cancer analysis of COL15A1: an immunological and prognostic biomarker.

作者信息

Zhu Lei, Jiang Qianheng, Meng Jun, Zhao Haichun, Lin Jie

机构信息

Graduate School, Dalian Medical University, Dalian, Liaoning, China.

Department of General Surgery, Panjin Liao-Oil Field Gem Flower Hospital, Panjin, Liaoning, China.

出版信息

Discov Oncol. 2024 Aug 1;15(1):325. doi: 10.1007/s12672-024-01200-z.

Abstract

Collagen, type XV, alpha 1 (COL15A1) belongs to the collagen superfamily, which can influence disease progression by modulating immune pathways. Although the growing number of investigations demonstrating the indispensable role of COL15A1 in the progression of certain tumors, no pan-cancer assessment of COL15A1 is accessible to date. Therefore, the available data was used to explore the role of COL15A1 in 33 types of tumors and to investigate their potential immune function. Numerous bioinformatics approaches were used to research the potential oncogenic role of COL15A1, including analysis of tumor prognosis, microsatellite instability (MSI), tumor mutational burden (TMB), single nucleotide polymorphism (SNP), drug sensitivity, immune cell infiltration, and the correlation between cancer stem cells (CSCs) and COL15A1 expression. The outcome implies that most tumors had a high expression of COL15A1, and COL15A1 manifested different relationships with prognosis in different tumors, including both positive and negative correlations. COL15A1 was also found to have a significant correlation with MSI, TMB, and immune infiltrating cells. Our study suggests that COL15A1 may serve as a prognostic marker for malignancy because of its differential expression in tissues and their function in tumor immunity.

摘要

XV型胶原α1链(COL15A1)属于胶原超家族,可通过调节免疫途径影响疾病进展。尽管越来越多的研究表明COL15A1在某些肿瘤进展中起不可或缺的作用,但迄今为止尚无COL15A1的泛癌评估。因此,利用现有数据探讨COL15A1在33种肿瘤中的作用,并研究其潜在的免疫功能。采用多种生物信息学方法研究COL15A1的潜在致癌作用,包括分析肿瘤预后、微卫星不稳定性(MSI)、肿瘤突变负荷(TMB)、单核苷酸多态性(SNP)、药物敏感性、免疫细胞浸润以及癌症干细胞(CSC)与COL15A1表达之间的相关性。结果表明,大多数肿瘤中COL15A1表达较高,且COL15A1在不同肿瘤中与预后表现出不同的关系,包括正相关和负相关。还发现COL15A1与MSI、TMB和免疫浸润细胞有显著相关性。我们的研究表明,由于COL15A1在组织中的差异表达及其在肿瘤免疫中的作用,它可能作为恶性肿瘤的预后标志物。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c654/11294514/ce72be550ca7/12672_2024_1200_Fig1_HTML.jpg

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