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SF1和SF2解旋酶在生物技术应用中的作用。

The Role of SF1 and SF2 Helicases in Biotechnological Applications.

作者信息

Dai Jing, Liu Ronghui, He Shujun, Li Tie, Hu Yuhang, Huang Huiqun, Li Yi, Guo Xinrong

机构信息

Dongguan Key Laboratory of Public Health Laboratory Science, School of Public Health, Guangdong Medical University, Dongguan, 523808, People's Republic of China.

School of Microelectronic, Southern University of Science and Technology, Shenzhen, 518000, People's Republic of China.

出版信息

Appl Biochem Biotechnol. 2024 Dec;196(12):9064-9084. doi: 10.1007/s12010-024-05027-w. Epub 2024 Aug 2.

Abstract

Helicases, which utilize ATP hydrolysis to separate nucleic acid duplexes, play crucial roles in DNA and RNA replication, repair, recombination, and transcription. Categorized into the major groups superfamily 1 (SF1) and superfamily 2 (SF2), alongside four minor groups, these proteins exhibit a conserved catalytic core indicative of a shared evolutionary origin while displaying functional diversity through interactions with various substrates. This review summarizes the structures, functions and mechanisms of SF1 and SF2 helicases, with an emphasis on conserved ATPase sites and RecA-like domains essential for their enzymatic and nucleic acid binding capabilities. It highlights the unique 1B and 2B domains in SF1 helicases and their impact on enzymatic activity. The DNA unwinding process is detailed, covering substrate recognition, ATP hydrolysis, and conformational changes, while addressing debates over the active form of UvrD helicase and post-unwinding dissociation. More importantly, this review discusses the biotechnological potential of helicases in emerging technologies such as nanopore sequencing, protein sequencing, and isothermal amplification, focusing on their use in pathogen detection, biosensor enhancement, and cancer treatment. As understanding deepens, innovative applications in genome editing, DNA sequencing, and synthetic biology are anticipated.

摘要

解旋酶利用ATP水解来分离核酸双链体,在DNA和RNA复制、修复、重组及转录过程中发挥着关键作用。这些蛋白质分为主要的超家族1(SF1)和超家族2(SF2),以及四个较小的家族,它们展现出一个保守的催化核心,表明有着共同的进化起源,同时通过与各种底物的相互作用表现出功能多样性。本综述总结了SF1和SF2解旋酶的结构、功能及机制,重点关注对其酶活性和核酸结合能力至关重要的保守ATP酶位点和类RecA结构域。它突出了SF1解旋酶中独特的1B和2B结构域及其对酶活性的影响。详细阐述了DNA解旋过程,涵盖底物识别、ATP水解和构象变化,同时讨论了关于UvrD解旋酶活性形式及解旋后解离的争议。更重要的是,本综述讨论了解旋酶在纳米孔测序、蛋白质测序和等温扩增等新兴技术中的生物技术潜力,重点关注它们在病原体检测、生物传感器增强和癌症治疗中的应用。随着认识的深入,预计在基因组编辑、DNA测序和合成生物学方面会有创新应用。

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