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动力学拆分作为前生物化学中对映体富集的通用方法。

Kinetic Resolution as a General Approach to Enantioenrichment in Prebiotic Chemistry.

机构信息

Department of Chemistry, Scripps Research, La Jolla, California 92037, United States.

出版信息

Acc Chem Res. 2024 Aug 20;57(16):2234-2244. doi: 10.1021/acs.accounts.4c00135. Epub 2024 Aug 8.

Abstract

ConspectusThe origin of the single chirality of the chemical building blocks of life remains an intriguing topic of research, even after decades of experimental and theoretical work proposing processes that may break symmetry and induce chiral amplification, a term that may be defined as the enhancement of enantiomeric excess starting from prochiral substrates or from a racemic mixture or a small imbalance between enantiomers. Studies aimed at understanding prebiotically plausible pathways to these molecules have often neglected the issue of chirality, with a focus on the stereochemical direction of these reactions generally being pursued after reaction discovery. Our work has explored how the stereochemical outcome for the synthesis of amino acids and sugars might be guided to rationalize the origin of biological homochirality. The mechanistic interconnection between enantioenrichment in these two groups of molecules provides insights concerning the handedness extant in modern biology. In five separate examples involving the synthesis of life's building blocks, including sugars, RNA precursors, amino acids, and peptides, kinetic resolution emerges as a key protocol for enantioenrichment from racemic molecules directed by chiral source molecules. Several of these examples involve means not only for chiral amplification but also symmetry breaking and across a range of racemic monomer molecules. Several important implications emerge from these studies: one, kinetic resolution of the primordial chiral sugar, glyceraldehyde, plays a key role in a number of different prebiotically plausible reactions; two, the emergence of homochirality in sugars and amino acids is inherently intertwined, with clear synergy between the biological hand of each molecule class; three, the origin story for the homochirality of enzymes and modern metabolism points toward kinetic resolution of racemic amino acids in networks that later evolved to include sophisticated and complete catalytic and co-catalytic cycles; four, a preference for heterochiral ligation forming product molecules that cannot lead to biologically competent polymers can in fact be a driving force for a route to homochiral polymer chains; and five, enantioenrichment in complex mixtures need not be addressed one compound at a time, because kinetic resolution induces symmetry breaking and chirality transfer that may lead to general protocols rather than specific cases tailored to each individual molecule. Such chirality transfer mechanisms perhaps presage strategies utilized in modern biology.Our latest work extends the study of monomer enantioenrichment to the ligation of these molecules into the extended homochiral chains leading to the complex polymers of modern biology. A central theme in all of these reactions is the key role that kinetic resolution of a racemic mixture of amino acids or sugars plays in enabling enantioenrichment under prebiotically plausible conditions. This work has uncovered important trends in symmetry breaking, chirality transfer, and chiral amplification. Kinetic resolution of racemic mixtures emerges as a general solution for chiral amplification in prebiotic chemistry, leading to the single chirality of complex biological molecules and genetic polymers.

摘要

概述生命化学构建块单一手性的起源仍然是一个有趣的研究课题,即使经过几十年的实验和理论工作提出了可能打破对称性并诱导手性放大的过程,手性放大可以定义为从前手性底物或外消旋混合物或手性对映体之间的微小不平衡开始增强对映体过量。旨在理解这些分子的前生物似然途径的研究往往忽略了手性问题,通常在反应发现后才关注这些反应的立体化学方向。我们的工作探讨了如何指导氨基酸和糖的合成的立体化学结果,以合理化生物同手性的起源。这两组分子的对映体富集的机制联系提供了关于现代生物学中存在的手性的见解。在涉及生命构建块合成的五个单独示例中,包括糖、RNA 前体、氨基酸和肽,动力学拆分作为从手性源分子定向的外消旋分子中富集对映体的关键方案出现。这些示例中的几个不仅涉及手性放大,而且还涉及打破对称性和跨越一系列外消旋单体分子的方法。这些研究产生了几个重要的启示:一是原始手性糖甘油醛的动力学拆分在许多不同的前生物似然反应中起着关键作用;二是糖和氨基酸中同手性的出现本质上是交织在一起的,每个分子类别的生物手之间具有明显的协同作用;三是酶和现代代谢同手性起源的故事指向在后来演变成包括复杂和完整的催化和共催化循环的网络中对消旋氨基酸的动力学拆分;四是形成不能产生有生物活性聚合物的产物分子的异手性键合的偏好实际上可以成为通往同手性聚合物链的途径的驱动力;五是不必一次解决复杂混合物中的对映体富集问题,因为动力学拆分会诱导打破对称性和手性转移,从而导致一般的方案而不是针对每个单独分子的特定情况。这种手性转移机制也许预示着现代生物学中使用的策略。我们的最新工作将单体对映体富集的研究扩展到将这些分子连接成导致现代生物学复杂聚合物的延伸同手性链。所有这些反应的一个核心主题是动力学拆分外消旋氨基酸或糖混合物在允许在手性前体条件下对映体富集方面的关键作用。这项工作揭示了对称性破坏、手性转移和手性放大的重要趋势。外消旋混合物的动力学拆分成为前生物化学中手性放大的一般解决方案,导致复杂生物分子和遗传聚合物的单一手性。

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