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香豆素衍生物瑞香素与卵清蛋白的结合相互作用:对结合和抗纤维蛋白形成研究中金属离子和 pH 值对结合影响的分子见解。

Binding Interaction of Coumarin Derivative Daphnetin with Ovalbumin: Molecular Insights into the Complexation Process and Effects of Metal Ions and pH in the Binding and Antifibrillation Studies.

机构信息

Department of Chemical and Biological Sciences, National Institute of Technology Meghalaya, Shillong 793003, India.

Department of Chemistry, National Institute of Technology Rourkela, Rourkela, Odisha 769008, India.

出版信息

Mol Pharm. 2024 Sep 2;21(9):4708-4725. doi: 10.1021/acs.molpharmaceut.4c00675. Epub 2024 Aug 8.

DOI:10.1021/acs.molpharmaceut.4c00675
PMID:39115967
Abstract

This study investigates the interaction between daphnetin and ovalbumin (OVA) as well as its potential to inhibit OVA fibrillation using both spectroscopic and computational analysis. A moderate binding affinity of 1 × 10 M was observed between OVA and daphnetin, with a static quenched mechanism identified during the fluorescence quenching processes. Metal ions' (Cu and Zn) presence led to an increase in the binding affinities of daphnetin toward OVA, mirroring a similar trend observed with the pH variation. Synchronous and 3D fluorescence studies indicated an increase in the polarity of the microenvironment surrounding the Trp residues during binding. Interestingly, circular dichroism and Fourier transform infrared studies showed a significant change in the secondary structure of OVA upon binding with daphnetin. The efficacy of daphnetin in inhibiting protein fibrillation was confirmed through thioflavin T and Congo Red binding assays along with fluorescence microscopic imaging analysis. The thermodynamic assessment showed positive Δ° [+(29.34 ± 1.526) kJ mol] and Δ° [+(181.726 ± 5.465) J mol] values, indicating the presence of the hydrophobic forces, while negative Δ° signifies spontaneous binding interactions. These experimental findings were further correlated with computational analysis, revealing daphnetin dynamics within the binding site of OVA.

摘要

本研究通过光谱和计算分析研究了瑞香素与卵清蛋白(OVA)之间的相互作用及其抑制 OVA 纤丝形成的潜力。研究发现,OVA 与瑞香素之间存在中等强度的结合亲和力(1×10 M),在荧光猝灭过程中确定了静态猝灭机制。金属离子(Cu 和 Zn)的存在导致瑞香素与 OVA 的结合亲和力增加,与 pH 变化观察到的趋势相似。同步和 3D 荧光研究表明,在结合过程中,色氨酸残基周围微环境的极性增加。有趣的是,圆二色性和傅里叶变换红外研究表明,瑞香素与 OVA 结合后,OVA 的二级结构发生了显著变化。通过考马斯亮蓝和刚果红结合分析以及荧光显微镜成像分析证实了瑞香素抑制蛋白质纤丝形成的功效。热力学评估显示正值Δ° [+(29.34 ± 1.526) kJ mol]和Δ° [+(181.726 ± 5.465) J mol],表明存在疏水作用力,而负值Δ°表示自发的结合相互作用。这些实验结果与计算分析进一步相关,揭示了瑞香素在 OVA 结合位点的动力学。

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