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核桃酰基-ACP硫酯酶的鉴定与表达分析

The identification and expression analysis of walnut Acyl-ACP thioesterases.

作者信息

Wang Hui, Shi Jianqing, Guo Wanhui, Sun Xiaohui, Niu Shuhui, Chen Li, Liu Shenghong, Ma Lei

机构信息

Key Laboratory of Agro-Products Quality and Safety of Xinjiang, Institute of Agricultural Quality Standards and Testing Technology, Xinjiang Academy of Agricultural Sciences, Ürümqi, China.

Jiepin Planting Farmers' Professional Cooperative, Maigaiti, China.

出版信息

Front Genet. 2024 Jul 29;15:1409159. doi: 10.3389/fgene.2024.1409159. eCollection 2024.

Abstract

Walnuts ( L.), renowned for their nutritional potency, are a rich source of unsaturated fatty acids. Their regular intake plays a pivotal role in health maintenance and recuperation from a myriad of ailments. Fatty acyl-acyl carrier protein thioesterases, which orchestrate the hydrolysis of acyl-ACP thioester bonds, thereby yielding fatty acids of varying chain lengths, are instrumental in augmenting plant fatty acid content and modulating the balance between saturated and unsaturated fatty acids. Despite some investigative efforts into the synthesis and metabolic pathways of fatty acids in walnuts, our comprehension of Fat in walnuts remains rudimentary. This research undertook a comprehensive characterization of the JrFat family, predicated on the complete genome sequence of walnuts, leading to the identification of 8 JrFat genes and an exploration of their protein physicochemical properties. Utilizing and soybean Fat genes as outgroups, JrFat genes can be categorized into 5 distinct subgroups, three of which encompass a pair of homologous gene pairs. These genes have demonstrated remarkable conservation throughout the evolutionary process, with highly analogous conserved base sequences. The promoter region of JrFats genes predominantly harbors light response and plant hormone response regulatory elements, with no discernible disparity in promoter elements among different JrFats. Predictive analyses indicate that JrFats proteins engage extensively with walnut fatty acid synthesis and metabolism-associated proteins. qRT-PCR analysis reveals an initial surge in the expression of JrFats during the development of walnut kernels, which either stabilizes or diminishes following the hard core period. Homologous gene pairs exhibit analogous expression patterns, and the expression trajectory of JrFats aligns with the dynamic accumulation of fatty acids in kernels. The expression of exhibits a strong correlation with the content of Alpha-linolenic acid, while the expression of is inversely correlated with the content of two saturated fatty acids. Collectively, these findings enrich our understanding of fatty acid synthesis and metabolism in walnuts and furnish gene resources for enhancing the content and ratio of fatty acids in walnuts.

摘要

核桃(Juglans regia L.)以其丰富的营养价值而闻名,是不饱和脂肪酸的重要来源。经常食用核桃对维持健康以及从多种疾病中恢复起着关键作用。脂肪酰基 - 酰基载体蛋白硫酯酶负责催化酰基 - ACP硫酯键的水解,从而产生不同链长的脂肪酸,在增加植物脂肪酸含量和调节饱和脂肪酸与不饱和脂肪酸之间的平衡方面发挥着重要作用。尽管对核桃脂肪酸的合成和代谢途径进行了一些研究,但我们对核桃脂肪的了解仍然有限。本研究基于核桃的全基因组序列,对JrFat家族进行了全面表征,鉴定出8个JrFat基因,并对其蛋白质理化性质进行了探索。以拟南芥和大豆的Fat基因作为外群,JrFat基因可分为5个不同的亚组,其中3个亚组包含一对同源基因对。这些基因在进化过程中表现出显著的保守性,具有高度相似的保守碱基序列。JrFats基因的启动子区域主要含有光响应和植物激素响应调控元件,不同JrFats之间的启动子元件没有明显差异。预测分析表明,JrFats蛋白与核桃脂肪酸合成和代谢相关蛋白广泛相互作用。qRT-PCR分析显示,JrFats在核桃仁发育过程中表达量最初会激增,在硬核期之后表达量要么稳定要么下降。同源基因对表现出相似的表达模式,JrFats的表达轨迹与籽粒中脂肪酸的动态积累一致。JrFat3的表达与α - 亚麻酸含量呈强相关,而JrFat2的表达与两种饱和脂肪酸的含量呈负相关。总的来说,这些发现丰富了我们对核桃脂肪酸合成和代谢的理解,并为提高核桃脂肪酸含量和比例提供了基因资源。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/a069/11317280/b7c1ad356778/fgene-15-1409159-g001.jpg

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