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甘氨酰苯丙氨酰甘氨酸(GFG)肽自由基阳离子的结构和碎裂化学。

Structure and fragmentation chemistry of the peptide radical cations of glycylphenylalanylglycine (GFG).

机构信息

Department of Chemistry, University of Hong Kong, Hong Kong, China.

Department of Chemistry, York University, Toronto, ON, Canada.

出版信息

PLoS One. 2024 Aug 13;19(8):e0308164. doi: 10.1371/journal.pone.0308164. eCollection 2024.

DOI:10.1371/journal.pone.0308164
PMID:39137228
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11321575/
Abstract

Herein, we explore the generation and characterization of the radical cations of glycylphenylalanylglycine, or [GFG]•+, formed via dissociative electron-transfer reaction from the tripeptide to copper(II) within a ternary complex. A comprehensive investigation employing isotopic labeling, infrared multiple-photon dissociation (IRMPD) spectroscopy, and density functional theory (DFT) calculations elucidated the details and energetics in formation of the peptide radical cations as well as their dissociation products. Unlike conventional aromatic-containing peptide radical cations that primarily form canonical π-radicals, our findings reveal that 75% of the population of the experimentally produced [GFG]•+ precursors are [GFα•G]+, where the radical resides on the middle α-carbon of the phenylalanyl residue. This unexpected isomeric ion has an enthalpy of 6.8 kcal/mol above the global minimum, which has an N-terminal captodative structure, [Gα•FG]+, comprising 25% of the population. The [b₂-H]•+ product ions are also present in a ratio of 75/25 from [GFα•G]+/ [Gα•FG]+, the results of which are obtained from matches between the IRMPD action spectrum and predicted IR absorption spectra of the [b₂-H]•+ candidate structures, as well as from IRMPD isomer population analyses.

摘要

在此,我们探索了甘氨酰苯丙氨酰甘氨酸(或[GFG]+)自由基阳离子的生成和特性,该阳离子通过三肽与铜(II)之间的离解电子转移反应形成。采用同位素标记、红外多光子解离(IRMPD)光谱和密度泛函理论(DFT)计算的综合研究阐明了肽自由基阳离子形成及其解离产物的细节和能量学。与主要形成典型π-自由基的传统含芳香族肽自由基阳离子不同,我们的研究结果表明,实验产生的[GFG]+前体中 75%的自由基位于苯丙氨酸残基中间的α-碳原子上,形成[GFα•G]+。这种出人意料的异构离子的焓高于全球最小值 6.8 kcal/mol,其具有 N 端加电子结构[Gα•FG]+,占总离子的 25%。[b₂-H]+产物离子也以 75/25 的比例存在于[GFα•G]+/[Gα•FG]+之间,这是通过将 IRMPD 作用光谱与[b₂-H]+候选结构的预测红外吸收光谱进行匹配以及通过 IRMPD 异构体分析得出的结果。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/68b9908a34e9/pone.0308164.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/b5640edafe89/pone.0308164.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/1dfea9e7abbe/pone.0308164.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/f32bd708f95b/pone.0308164.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/bd31eb2ac0b8/pone.0308164.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/4313df3cca8b/pone.0308164.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/68b9908a34e9/pone.0308164.g006.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/b5640edafe89/pone.0308164.g001.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/1dfea9e7abbe/pone.0308164.g002.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/f32bd708f95b/pone.0308164.g003.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/bd31eb2ac0b8/pone.0308164.g004.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/4313df3cca8b/pone.0308164.g005.jpg
https://cdn.ncbi.nlm.nih.gov/pmc/blobs/22e9/11321575/68b9908a34e9/pone.0308164.g006.jpg

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Anal Chem. 2021 Feb 2;93(4):2687-2693. doi: 10.1021/acs.analchem.0c05042. Epub 2021 Jan 20.
2
Dissociative electron transfer of copper(ii) complexes of glycyl(glycyl/alanyl)tryptophan in vacuo: IRMPD action spectroscopy provides evidence of transition from zwitterionic to non-zwitterionic peptide structures.真空条件下甘氨酰(甘氨酰/丙氨酰)色氨酸铜(II)配合物的离解电子转移:IRMPD 动作光谱提供了从两性离子到非两性离子肽结构转变的证据。
Phys Chem Chem Phys. 2020 Jun 21;22(23):13084-13091. doi: 10.1039/d0cp02296a. Epub 2020 Jun 3.
3
Infrared ion spectroscopy in a modified quadrupole ion trap mass spectrometer at the FELIX free electron laser laboratory.在费利克斯自由电子激光实验室的一台经过改进的四极杆离子阱质谱仪中进行红外离子光谱分析。
Rev Sci Instrum. 2016 Oct;87(10):103108. doi: 10.1063/1.4964703.
4
Formation of a(1) ions directly from oxazolone b(2) ions: an energy-resolved and computational study.从恶唑酮b(2)离子直接形成a(1)离子:一项能量分辨和计算研究。
J Am Soc Mass Spectrom. 2015 May;26(5):774-81. doi: 10.1007/s13361-015-1080-7. Epub 2015 Mar 26.
5
Peptide radicals and cation radicals in the gas phase.气相中的肽自由基和阳离子自由基。
Chem Rev. 2013 Aug 14;113(8):6691-733. doi: 10.1021/cr400043s. Epub 2013 May 7.
6
Diagnosing the protonation site of b2 peptide fragment ions using IRMPD in the X-H (X = O, N, and C) stretching region.利用 X-H(X = O、N 和 C)伸缩区中的 IRMPD 来诊断 b2 肽片段离子的质子化位点。
J Am Soc Mass Spectrom. 2011 Sep;22(9):1645-50. doi: 10.1007/s13361-011-0173-1. Epub 2011 Jun 21.
7
Cysteine radical cation: A distonic structure probed by gas phase IR spectroscopy.半胱氨酸自由基正离子:气相红外光谱探测的离域结构。
Phys Chem Chem Phys. 2010 Sep 7;12(33):9794-800. doi: 10.1039/c003576a. Epub 2010 Jun 25.
8
Infrared spectroscopy of fragments of protonated peptides: direct evidence for macrocyclic structures of b5 ions.质子化肽片段的红外光谱:b5离子大环结构的直接证据。
J Am Chem Soc. 2009 Aug 19;131(32):11503-8. doi: 10.1021/ja903390r.
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