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关注鸟苷水凝胶:中红外光谱的综合分析。

Guanosine hydrogels in focus: A comprehensive analysis through mid-infrared spectroscopy.

机构信息

Università Politecnica delle Marche, Department of Life and Environmental Sciences, Via Brecce Bianche, Ancona, 60131, Italy.

Università Politecnica delle Marche, Department of Life and Environmental Sciences, Via Brecce Bianche, Ancona, 60131, Italy.

出版信息

Spectrochim Acta A Mol Biomol Spectrosc. 2025 Jan 5;324:124939. doi: 10.1016/j.saa.2024.124939. Epub 2024 Aug 8.

DOI:10.1016/j.saa.2024.124939
PMID:39137710
Abstract

Guanosine nucleosides and nucleotides have the peculiar ability to self-assemble in water to form supramolecular complex architectures from G-quartets to G-quadruplexes. G-quadruplexes exhibit in turn a large liquid crystalline lyotropic polymorphism, but they eventually cross-link or entangle to form a densely connected 3D network (a molecular hydrogel), able to entrap very large amount of water (up to the 99% v/v). This high water content of the hydrogels enables tunable softness, deformability, self-healing, and quasi-liquid properties, making them ideal candidates for different biotechnological and biomedical applications. In order to fully exploit their possible applications, Attenuated Total Reflection-Fourier Transform InfraRed (ATR-FTIR) spectroscopy was used to unravel the vibrational characteristics of supramolecular guanosine structures. First, the characteristic vibrations of the known quadruplex structure of guanosine 5-monophosphate, potassium salt (GMP/K), were investigated: the identified peaks reflected both the chemical composition of the sample and the formation of quartets, octamers, and quadruplexes. Second, the role of K and Na cations in promoting the quadruplex formation was assessed: infrared spectra confirmed that both cations induce the formation of G-quadruplexes and that GMP/K is more stable in the G-quadruplex organization. Finally, ATR-FTIR spectroscopy was used to investigate binary mixtures of guanosine (Gua) and GMP/K or GMP/Na, both systems forming G-hydrogels. The same G-quadruplex-based structure was found in both mixtures, but the proportion of Gua and GMP affected some features, like sugar puckering, guanine vibrations, and base stacking, reflecting the known side-to-side aggregation and bundle formation occurring in these binary systems.

摘要

鸟苷核苷和核苷酸具有独特的自组装能力,可在水中形成超分子复合结构,从 G-四联体到 G-四链体。G-四链体反过来又表现出大的液晶溶致多态性,但它们最终交联或缠结形成密集连接的 3D 网络(分子水凝胶),能够捕获非常大量的水(高达 99%v/v)。水凝胶的高含水量使它们具有可调的柔软性、可变形性、自修复性和准液体特性,使其成为不同生物技术和生物医学应用的理想候选物。为了充分利用它们可能的应用,衰减全反射-傅里叶变换红外(ATR-FTIR)光谱被用于揭示超分子鸟苷结构的振动特性。首先,研究了已知的鸟苷 5-单磷酸,钾盐(GMP/K)的四链体结构的特征振动:鉴定出的峰反映了样品的化学成分和四联体、八聚体和四链体的形成。其次,评估了 K 和 Na 阳离子在促进四链体形成中的作用:红外光谱证实,两种阳离子都诱导 G-四链体的形成,并且 GMP/K 在 G-四链体组织中更稳定。最后,ATR-FTIR 光谱用于研究鸟苷(Gua)和 GMP/K 或 GMP/Na 的二元混合物,这两种系统都形成 G-水凝胶。在这两种混合物中都发现了相同的基于 G-四联体的结构,但 Gua 和 GMP 的比例影响了一些特征,如糖的构象、鸟嘌呤的振动和碱基堆积,反映了在这些二元系统中发生的已知的侧向聚集和束形成。

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