Zazza Costantino, Sanna Nico, Borocci Stefano, Grandinetti Felice
Department for Innovation in Biological, Agro-Food and Forest systems, Università della Tuscia (DIBAF), L.go dell'Università, s.n.c., Viterbo, 01100, Italy.
CNR-ISTP (Istituto per la Scienza e Tecnologia dei Plasmi), Via G. Amendola 122/D, 70126, Bari, Italy.
Chemphyschem. 2024 Dec 2;25(23):e202400603. doi: 10.1002/cphc.202400603. Epub 2024 Oct 22.
Supramolecular contacts responsible for chemical interaction of cucurbit[7]uril (CB[7]) macrocycle on a Tolyl-Viologen-Phenylene-Imidazole (T-VPI) molecular thread, at acid pH (T-VPI-H) or after Ag cation addition (T-VPI-Ag), are analytically addressed in a computational framework combining Quantum Theory of Atoms in Molecules (QTAIM) with Density Functional Theory (DFT). In this respect, the crystallographic structure (CCDC number 2217466) is taken as reference condition for addressing the nature of the chemical interactions driving the shuttling of the CB[7] between T and P stations recently observed in dilute water solutions. Beside the host(CB[7]) vs guest(T-VPI-H or T-VPI-Ag) complexation, the coordination sphere of the Ag cation is also investigated by means of local electronic energy density - H(r) - descriptors. The derived non-covalent interaction patterns are found to support diagnostic H NMR signals used for detecting the mutual position of the CB[7] along the axle. This work highlights the potentialities of a QTAIM based approach in the characterization of supramolecular and metal-complexation effects in molecular aggregates such as not-interlocked synthetic molecular shuttles.
在结合分子中原子量子理论(QTAIM)和密度泛函理论(DFT)的计算框架内,对葫芦[7]脲(CB[7])大环在酸性pH值下(T-VPI-H)或添加银阳离子后(T-VPI-Ag),在甲苯基 - 紫精 - 亚苯基 - 咪唑(T-VPI)分子链上负责化学相互作用的超分子接触进行了分析研究。在这方面,晶体结构(CCDC编号2217466)被用作参考条件,以探讨驱动最近在稀水溶液中观察到的CB[7]在T和P位点之间穿梭的化学相互作用的性质。除了主体(CB[7])与客体(T-VPI-H或T-VPI-Ag)的络合作用外,还通过局部电子能量密度 - H(r) - 描述符研究了银阳离子的配位球。发现所推导的非共价相互作用模式支持用于检测CB[7]沿轴的相互位置的诊断性核磁共振信号。这项工作突出了基于QTAIM的方法在表征分子聚集体(如非互锁合成分子穿梭体)中的超分子和金属络合效应方面的潜力。