Ghorbani Mahin
Department of Dental Medicine, Division of Oral Diagnostics and Rehabilitation, Karolinska Institute, Stockholm, Sweden.
Department of Laboratory Medicine, Division of Pathology, Karolinska Institute, Stockholm, Sweden.
Schizophr Bull Open. 2023 Oct 12;4(1):sgad029. doi: 10.1093/schizbullopen/sgad029. eCollection 2023 Jan.
Research suggests a potential role of the oral-neuro and gut-brain axes in schizophrenia, involving non-brain microbiomes such as salivary and gut microbiomes. However, the blood-brain barrier effectively prevents microorganism entry. Additionally, despite approximately 8% of the human genome consisting of and the established link between viral infections and schizophrenia, the presence of a resident virome (a viral component of the microbiome) in the brain and its association with mental disorders remain unexplored.
Whole-genome sequencing raw data from postmortem Brodmann Area 46 (BA46) tissue from 49 individuals (20 healthy controls [HCs], 29 with schizophrenia [SCZs]) obtained from the NCBI SRA database from BioProject: PRJNA422380.Virome profiles were retrieved using Metaphlan3, and viral signatures were identified using linear discriminant analysis effect size (LEfSe). Mann-Whitney tests and receiver operating characteristic curve validated the viral signatures.
In BA46, 30 distinct species representing 9 phyla, 10 classes, 10 orders, 13 families, and 19 genera were identified. HCs exhibited greater alpha diversity, and there were significant differences in beta diversity between the groups. LEfSe analysis highlighted distinct viral levels, including , , , , , and in HCs, while and unknown virus showed higher levels in schizophrenia.
This is the first study to identify a human brain virome associated with schizophrenia in BA46. Brain virome dysbiosis may be associated with mental illness, and viral signatures may serve as biomarkers for the early detection of schizophrenia.
研究表明,口腔-神经轴和肠-脑轴在精神分裂症中可能发挥作用,涉及唾液和肠道微生物群等非脑微生物群。然而,血脑屏障有效地阻止了微生物的进入。此外,尽管人类基因组约8%由[此处原文缺失内容]组成,且病毒感染与精神分裂症之间已确立联系,但大脑中常驻病毒组(微生物群的病毒成分)的存在及其与精神障碍的关联仍未得到探索。
从美国国立生物技术信息中心(NCBI)序列读取档案(SRA)数据库(生物项目:PRJNA422380)获取49名个体(20名健康对照[HCs],29名精神分裂症患者[SCZs])死后布罗德曼46区(BA46)组织的全基因组测序原始数据。使用MetaPhlan3检索病毒组谱,并使用线性判别分析效应大小(LEfSe)识别病毒特征。曼-惠特尼检验和受试者工作特征曲线验证了病毒特征。
在BA46中,鉴定出代表9个门、10个纲、10个目、13个科和19个属的30个不同物种。HCs表现出更高的α多样性,且两组之间的β多样性存在显著差异。LEfSe分析突出了不同的病毒水平,包括HCs中的[此处原文缺失内容]、[此处原文缺失内容]、[此处原文缺失内容]、[此处原文缺失内容]、[此处原文缺失内容]和[此处原文缺失内容],而[此处原文缺失内容]和未知病毒在精神分裂症中表现出更高的水平。
这是第一项在BA46中鉴定出与精神分裂症相关的人类大脑病毒组的研究。大脑病毒组失调可能与精神疾病有关,病毒特征可能作为精神分裂症早期检测的生物标志物。