Suzuki Koki, Nojiri Ryoya, Matsusaki Motonori, Mabuchi Takuya, Kanemura Shingo, Ishii Kotone, Kumeta Hiroyuki, Okumura Masaki, Saio Tomohide, Muraoka Takahiro
Department of Applied Chemistry, Graduate School of Engineering, Tokyo University of Agriculture and Technology Koganei Tokyo 184-8588 Japan
Division of Molecular Life Science, Institute of Advanced Medical Sciences, Tokushima University Tokushima 770-8503 Japan
Chem Sci. 2024 Jul 29;15(32):12676-12685. doi: 10.1039/d4sc02123a. eCollection 2024 Aug 14.
Proteins form native structures through folding processes, many of which proceed through intramolecular hydrophobic effect, hydrogen bond and disulfide-bond formation. , protein aggregation is prevented even in the highly condensed milieu of a cell through folding mediated by molecular chaperones and oxidative enzymes. Chemical approaches to date have not replicated such exquisite mediation. Oxidoreductases efficiently promote folding by the cooperative effects of oxidative reactivity for disulfide-bond formation in the client unfolded protein and chaperone activity to mitigate aggregation. Conventional synthetic folding promotors mimic the redox-reactivity of thiol/disulfide units but do not address client-recognition units for inhibiting aggregation. Herein, we report thiol/disulfide compounds containing client-recognition units, which act as synthetic oxidoreductase-mimics. For example, compound βCDSH/SS bears a thiol/disulfide unit at the wide rim of β-cyclodextrin as a client recognition unit. βCDSH/SS shows promiscuous binding to client proteins, mitigates protein aggregation, and accelerates disulfide-bond formation. In contrast, positioning a thiol/disulfide unit at the narrow rim of β-cyclodextrin promotes folding less effectively through preferential interactions at specific residues, resulting in aggregation. The combination of promiscuous client-binding and redox reactivity is effective for the design of synthetic folding promoters. βCDSH/SS accelerates oxidative protein folding at highly condensed sub-millimolar protein concentrations.
蛋白质通过折叠过程形成天然结构,其中许多过程是通过分子内疏水作用、氢键形成和二硫键形成来进行的。即使在细胞高度浓缩的环境中,通过分子伴侣和氧化酶介导的折叠,蛋白质聚集也能得到抑制。迄今为止,化学方法尚未复制出如此精确的介导作用。氧化还原酶通过在底物未折叠蛋白中形成二硫键的氧化反应性与减轻聚集的伴侣活性之间的协同作用,有效地促进折叠。传统的合成折叠促进剂模仿硫醇/二硫键单元的氧化还原反应性,但没有涉及抑制聚集的底物识别单元。在此,我们报道了含有底物识别单元的硫醇/二硫化合物,它们可作为合成氧化还原酶模拟物。例如,化合物βCDSH/SS在β-环糊精的宽边缘带有硫醇/二硫单元作为底物识别单元。βCDSH/SS对底物蛋白具有广泛的结合能力,可减轻蛋白质聚集,并加速二硫键形成。相比之下,将硫醇/二硫单元定位在β-环糊精的窄边缘通过与特定残基的优先相互作用促进折叠的效果较差,从而导致聚集。广泛的底物结合和氧化还原反应性的结合对于合成折叠促进剂的设计是有效的。βCDSH/SS在高度浓缩的亚毫摩尔蛋白浓度下加速氧化蛋白折叠。