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城市化为河流塑体中抗生素抗性组和移动组的生态风险带来的元基因组分析

Metagenomic insights into ecological risk of antibiotic resistome and mobilome in riverine plastisphere under impact of urbanization.

机构信息

CAS Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, Fujian 361021, China.

CAS Key Laboratory of Urban Pollutant Conversion, Institute of Urban Environment, Chinese Academy of Sciences, Xiamen, Fujian 361021, China; University of Chinese Academy of Sciences, Beijing 101408, China.

出版信息

Environ Int. 2024 Aug;190:108946. doi: 10.1016/j.envint.2024.108946. Epub 2024 Aug 11.

Abstract

Microplastics (MPs) are of increasing concern due to their role as reservoirs for antibiotic resistance genes (ARGs) and pathogens. To date, few studies have explored the influence of anthropogenic activities on ARGs and mobile genetic elements (MGEs) within various riverine MPs, in comparison to their natural counterparts. Here an in-situ incubation was conducted along heavily anthropogenically-impacted Houxi River to characterize the geographical pattern of antibiotic resistome, mobilome and pathogens inhabiting MPs- and leaf-biofilms. The metagenomics result showed a clear urbanization-driven profile in the distribution of ARGs, MGEs and pathogens, with their abundances sharply increasing 4.77 to 19.90 times from sparsely to densely populated regions. The significant correlation between human fecal marker crAssphage and ARG (R = 0.67, P=0.003) indicated the influence of anthropogenic activity on ARG proliferation in plastisphere and natural leaf surfaces. And mantel tests and random forest analysis revealed the impact of 17 socio-environmental factors, e.g., population density, antibiotic concentrations, and pore volume of materials, on the dissemination of ARGs. Partial least squares-path modeling further unveiled that intensifying human activities not only directly boosted ARGs abundance but also exerted a comparable indirect impact on ARGs propagation. Furthermore, the polyvinylchloride plastisphere created a pathogen-friendly habitat, harboring higher abundances of ARGs and MGEs, while polylactic acid are not likely to serve as vectors for pathogens in river, with a lower resistome risk score than that in leaf-biofilms. This study highlights the diverse ecological risks associated with the dissemination of ARGs and pathogens in varied MPs, offering insights for the policymaking of usage and control of plastics within urbanization.

摘要

微塑料(MPs)因其作为抗生素耐药基因(ARGs)和病原体的储存库而引起了越来越多的关注。迄今为止,与天然 MPs 相比,很少有研究探讨人为活动对各种河流 MPs 内 ARGs 和移动遗传元件(MGEs)的影响。在这里,对受人为严重影响的后溪河进行了原位培养,以表征 MPs 和叶生物膜中抗生素抗性组、移动组和病原体的地理分布模式。宏基因组学结果显示,ARGs、MGEs 和病原体的分布呈现出明显的城市化驱动特征,其丰度从人口稀少地区到人口密集地区急剧增加了 4.77 到 19.90 倍。人类粪便标志物 crAssphage 与 ARG 之间的显著相关性(R=0.67,P=0.003)表明,人为活动对塑料圈和天然叶表面 ARG 增殖的影响。Mantel 检验和随机森林分析揭示了 17 个社会环境因素,如人口密度、抗生素浓度和材料的孔隙体积,对 ARG 传播的影响。偏最小二乘路径模型进一步揭示,强化人类活动不仅直接促进了 ARG 的丰度,而且对 ARG 的传播也产生了相当大的间接影响。此外,聚氯乙烯塑料圈创造了有利于病原体的栖息地,含有更高丰度的 ARGs 和 MGEs,而聚乳酸不太可能成为河流中病原体的载体,其抗药性风险评分低于叶生物膜。本研究强调了不同 MPs 中 ARGs 和病原体传播所带来的多样化生态风险,为城市化进程中塑料的使用和控制政策制定提供了参考。

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