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基于两阶段集成学习的 PD-1/PD-L1 抑制剂相关心脏不良事件预测和分级模型:一项多中心回顾性研究。

A two-stage ensemble learning based prediction and grading model for PD-1/PD-L1 inhibitor-related cardiac adverse events: A multicenter retrospective study.

机构信息

Department of Pharmacy, Fujian Medical University Union Hospital, Fuzhou, PR China; College of Pharmacy, Fujian Medical University, Fuzhou, PR China.

Department of Pharmacy, Fujian Medical University Affiliated Nanping First Hospital, Nanping, PR China.

出版信息

Comput Methods Programs Biomed. 2024 Oct;255:108360. doi: 10.1016/j.cmpb.2024.108360. Epub 2024 Aug 5.

Abstract

BACKGROUND

Immune-related cardiac adverse events (ircAEs) caused by programmed cell death protein-1 (PD-1) and programmed death-ligand-1 (PD-L1) inhibitors can lead to fulminant and even fatal consequences. This study aims to develop a prediction and grading model for ircAEs, enabling graded management of patients.

METHODS

This study utilized medical record systems from two medical institutions to develop a prediction and grading model for ircAEs using ten machine learning algorithms and two variable screening methods. The model was developed based on a two-stage ensemble learning framework. In the first stage, the ircAEs and non-ircAEs cases were classified. In the second stage, ircAEs cases were grouped into grades 1-2 and 3-5. The experiments were evaluated using five-fold cross-validation. The model's prediction performance was assessed using accuracy, precision, recall, F1 value, Brier score, receiver operating characteristic curve area (AUC), and area under the precision-recall curve (AUPR).

RESULTS

615 patients were included in the study. 147 experienced ircAEs, and 44 experienced grade 3-5 ircAEs. The soft voting classifier trained using the variables screened by feature importance ranking performed better than other classifiers in both stages. The average AUC for the first and second stages is 84.18 % and 85.13 %, respectively. In the first stage, the three most important variables are N-terminal B-type natriuretic peptide (NT-proBNP), interleukin-2 (IL-2), and C-reactive protein (CRP). In the second stage, the patient's age, NT-proBNP, and left ventricular ejection fraction (LVEF) are the three most critical variables.

CONCLUSIONS

The prediction and grading model of ircAEs based on two-stage ensemble learning established in this study has good performance and potential clinical application.

摘要

背景

程序性死亡蛋白-1(PD-1)和程序性死亡配体-1(PD-L1)抑制剂引起的免疫相关心脏不良事件(ircAEs)可导致暴发性甚至致命后果。本研究旨在开发ircAEs 的预测和分级模型,实现患者的分级管理。

方法

本研究利用两家医疗机构的病历系统,采用十种机器学习算法和两种变量筛选方法,建立了ircAEs 的预测和分级模型。该模型基于两阶段集成学习框架构建。在第一阶段,将 ircAEs 和非 ircAEs 病例进行分类。在第二阶段,将 ircAEs 病例分为 1-2 级和 3-5 级。实验采用五折交叉验证进行评估。采用准确率、精确率、召回率、F1 值、Brier 得分、受试者工作特征曲线下面积(AUC)和精度-召回曲线下面积(AUPR)评估模型的预测性能。

结果

本研究纳入 615 例患者。其中 147 例发生 ircAEs,44 例发生 3-5 级 ircAEs。基于特征重要性排序筛选变量训练的软投票分类器在两个阶段的表现均优于其他分类器。第一阶段和第二阶段的平均 AUC 分别为 84.18%和 85.13%。在第一阶段,三个最重要的变量是 N 末端 B 型利钠肽(NT-proBNP)、白细胞介素-2(IL-2)和 C 反应蛋白(CRP)。在第二阶段,患者的年龄、NT-proBNP 和左心室射血分数(LVEF)是三个最关键的变量。

结论

本研究建立的基于两阶段集成学习的 ircAEs 预测和分级模型具有良好的性能和潜在的临床应用价值。

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