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功能基因组学研究在精准风湿病学中的重要性。

The importance of functional genomics studies in precision rheumatology.

作者信息

Piedade Ana Pires, Butler Jake, Eyre Stephen, Orozco Gisela

机构信息

Centre for Genetics and Genomics Versus Arthritis, Division of Musculoskeletal and Dermatological Sciences, School of Biological Sciences, Faculty of Biology, Medicine and Health, The University of Manchester, Manchester, UK; NIHR Manchester Biomedical Research Centre, Manchester University NHS Foundation Trust, Manchester Academic Health Science Centre, Manchester, UK.

出版信息

Best Pract Res Clin Rheumatol. 2024 Dec;38(4):101988. doi: 10.1016/j.berh.2024.101988. Epub 2024 Aug 22.

Abstract

Rheumatic diseases, those that affect the musculoskeletal system, cause significant morbidity. Among risk factors of these diseases is a significant genetic component. Recent advances in high-throughput omics techniques now allow a comprehensive profiling of patients at a genetic level through genome-wide association studies. Without functional interpretation of variants identified through these studies, clinical insight remains limited. Strategies include statistical fine-mapping that refine the list of variants in loci associated with disease, whilst colocalization techniques attempt to attribute function to variants that overlap a genetically active chromatin annotation. Functional validation using genome editing techniques can be used to further refine genetic signals and identify key pathways in cell types relevant to rheumatic disease biology. Insight gained from the combination of genetic studies and functional validation can be used to improve precision medicine in rheumatic diseases by allowing risk prediction and drug repositioning.

摘要

风湿性疾病,即那些影响肌肉骨骼系统的疾病,会导致严重的发病率。这些疾病的风险因素中存在显著的遗传成分。高通量组学技术的最新进展现在允许通过全基因组关联研究在基因水平上对患者进行全面分析。如果不对通过这些研究鉴定出的变异进行功能解释,临床见解仍然有限。策略包括统计精细定位,它能细化与疾病相关位点的变异列表,而共定位技术则试图将功能归因于与基因活性染色质注释重叠的变异。使用基因组编辑技术进行功能验证可用于进一步细化遗传信号,并识别与风湿性疾病生物学相关的细胞类型中的关键途径。通过遗传研究和功能验证相结合获得的见解可用于通过风险预测和药物重新定位来改善风湿性疾病的精准医学。

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