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SARS-CoV-2 核衣壳蛋白 N 端结构域和富含丝氨酸-精氨酸的无规卷曲区的 H、N 和 C 共振峰归属。

H, N, and C resonance assignments of the N-terminal domain and ser-arg-rich intrinsically disordered region of the nucleocapsid protein of the SARS-CoV-2.

机构信息

National Center of Nuclear Magnetic Resonance, Institute of Medical Biochemistry (IBqM), Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.

National Center of Nuclear Magnetic Resonance (CNRMN), National Center for Structural Biology and Bioimaging (CENABIO), Federal University of Rio de Janeiro, Rio de Janeiro, Brazil.

出版信息

Biomol NMR Assign. 2024 Dec;18(2):219-225. doi: 10.1007/s12104-024-10191-5. Epub 2024 Aug 22.

Abstract

The nucleocapsid (N) protein of SARS-CoV-2 is a multifunctional protein involved in nucleocapsid assembly and various regulatory functions. It is the most abundant protein during viral infection. Its functionality is closely related to its structure, which comprises two globular domains, the N-terminal domain (NTD) and the C-terminal domain (CTD), flanked by intrinsically disordered regions. The linker between the NTD and CTD includes a Serine-Arginine rich (SR) region, which is crucial for the regulation of the N protein's function. Here, we report the near-complete assignment of the construct containing the NTD followed by the SR region (NTD-SR). Additionally, we describe the dynamic nature of the SR region and compare it with all other available chemical shift assignments reported for the SR region.

摘要

新型冠状病毒的核衣壳(N)蛋白是一种多功能蛋白,参与核衣壳组装和各种调节功能。它是病毒感染过程中含量最丰富的蛋白。其功能与其结构密切相关,结构由两个球状结构域组成,即 N 端结构域(NTD)和 C 端结构域(CTD),两侧为无序区域。NTD 和 CTD 之间的连接区包含富含丝氨酸-精氨酸(SR)的区域,该区域对于 N 蛋白功能的调节至关重要。在这里,我们报告了包含 NTD 及随后的 SR 区(NTD-SR)的构建体的近乎完整的分配。此外,我们描述了 SR 区的动态性质,并将其与所有其他已报道的用于 SR 区的化学位移分配进行了比较。

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