State Key Laboratory of Analytical Chemistry for Life Science, School of Chemistry & Chemical Engineering, Nanjing University, Nanjing 210023, China.
Laboratoire d'Optique et Biosciences, Ecole Polytechnique, CNRS, INSERM, Institut Polytechnique de Paris, 91120 Palaiseau, France.
Anal Chem. 2024 Sep 10;96(36):14590-14597. doi: 10.1021/acs.analchem.4c03013. Epub 2024 Aug 25.
Hemin/G-quadruplex (hG4) complexes are frequently used as artificial peroxidase-like enzymatic systems (termed G4 DNAzymes) in many biosensing applications, in spite of a rather low efficiency, notably in terms of detection limits. To tackle this issue, we report herein a strategy in which hemin is chemically modified with the amino acids found in the active site of parent horseradish peroxidase (HRP), with the aim of recreating an environment conducive to high catalytic activity. When hemin is conjugated with a single arginine, it associates with G4 to create an arginine-hemin/G4 (R-hG4) DNAzyme that exhibits improved catalytic performances, characterized by kinetic analysis and DFT calculations. The practical relevance of this system was demonstrated with the implementation of biosensing assays enabling the chemiluminescent detection of G4-containing DNA and colorimetry detection of the flap endonuclease 1 (FEN1) enzyme with a high efficiency and sensitivity. Our results thus provide a guide for future enzyme engineering campaigns to create ever more efficient peroxidase-mimicking DNA-based systems.
血红素/G-四链体(hG4)复合物常被用作许多生物传感应用中的人工过氧化物酶样酶促系统(称为 G4 DNA 酶),尽管其效率相当低,尤其是在检测限方面。为了解决这个问题,我们在此报告了一种策略,即将血红素用辣根过氧化物酶(HRP)活性位点中发现的氨基酸进行化学修饰,目的是重新创造有利于高催化活性的环境。当血红素与单个精氨酸结合时,它会与 G4 结合形成精氨酸-血红素/G4(R-hG4)DNA 酶,该酶表现出改进的催化性能,这通过动力学分析和 DFT 计算得到了表征。该系统的实际相关性通过实施生物传感测定得到了证明,该测定能够以高效率和灵敏度实现含 G4 的 DNA 的化学发光检测和核酸内切酶 1(FEN1)的比色检测。因此,我们的结果为未来的酶工程提供了指导,以创建更高效的模拟过氧化物酶的基于 DNA 的系统。