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使用恒化学势分子动力学模拟预测尿素的多晶型特异性溶解度

Polymorph-Specific Solubility Prediction of Urea Using Constant Chemical Potential Molecular Dynamics Simulations.

作者信息

Aggarwal Manya, Soni Aashutosh, Karmakar Tarak

机构信息

Department of Chemistry, Indian Institute of Technology, Delhi, New Delhi 110016, India.

出版信息

J Phys Chem B. 2024 Sep 5;128(35):8477-8483. doi: 10.1021/acs.jpcb.4c02027. Epub 2024 Aug 26.

Abstract

Molecular dynamics simulations offer a robust approach to understanding the material properties within a system. Solubility is defined as the analytical composition of a saturated solution expressed as a proportion of designated solute in a designated solvent, according to IUPAC. It is a critical property of compounds and holds significance across numerous fields. Various computational techniques have been explored for determining solubility, including methods based on chemical potential determination, enhanced sampling simulation, and direct coexistence simulation, and lately, machine learning-based methods have shown promise. In this investigation, we have utilized Constant Chemical Potential Molecular Dynamics, a method rooted in direct coexistence simulation, to predict the solubility of urea polymorphs in aqueous solution. The primary purpose of using this method is to overcome the limitation of the direct simulation method by maintaining a constant chemical potential for a sufficiently long time. Urea is chosen as a prototypical system for our study, with a particular focus on three of its polymorphs. Our approach effectively discriminates between the polymorphs of urea based on their respective solubility values; polymorph III is found to have the highest solubility, followed by forms IV and I.

摘要

分子动力学模拟为理解系统内的材料特性提供了一种强大的方法。根据国际纯粹与应用化学联合会(IUPAC)的定义,溶解度是指饱和溶液的分析组成,以指定溶剂中指定溶质的比例表示。它是化合物的一个关键特性,在众多领域都具有重要意义。人们已经探索了各种计算技术来确定溶解度,包括基于化学势测定的方法、增强采样模拟和直接共存模拟,最近,基于机器学习的方法也显示出了前景。在这项研究中,我们利用了基于直接共存模拟的恒化学势分子动力学方法来预测尿素多晶型物在水溶液中的溶解度。使用这种方法的主要目的是通过在足够长的时间内保持恒定的化学势来克服直接模拟方法的局限性。尿素被选为我们研究的典型系统,特别关注其三种多晶型物。我们的方法基于各自的溶解度值有效地区分了尿素的多晶型物;发现多晶型III的溶解度最高,其次是IV型和I型。

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