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一种同时分析 T 细胞受体和分化状态的液质联用方法。

A mass cytometry method pairing T cell receptor and differentiation state analysis.

机构信息

Division of Immunology and Molecular Medicine, Department of Molecular and Cell Biology, University of California, Berkeley, Berkeley, CA, USA.

Department of Otolaryngology-Head and Neck Surgery, University of California, San Francisco, San Francisco, CA, USA.

出版信息

Nat Immunol. 2024 Sep;25(9):1754-1763. doi: 10.1038/s41590-024-01937-3. Epub 2024 Aug 27.

DOI:10.1038/s41590-024-01937-3
PMID:39191945
Abstract

T cell antigen receptor (TCR) recognition followed by clonal expansion is a fundamental feature of adaptive immune responses. Here, we present a mass cytometric (CyTOF) approach to track T cell responses by combining antibodies for specific TCR Vα and Vβ chains with antibodies against T cell activation and differentiation proteins in mice. This strategy identifies expansions of CD8 and CD4 T cells expressing specific Vβ and Vα chains with varying differentiation states in response to Listeria monocytogenes, tumors and respiratory influenza infection. Expanded T cell populations expressing Vβ chains could be directly linked to the recognition of specific antigens from Listeria, tumor cells or influenza. In the setting of influenza infection, we found that common therapeutic approaches of intramuscular vaccination or convalescent serum transfer altered the TCR diversity and differentiation state of responding T cells. Thus, we present a method to monitor broad changes in TCR use paired with T cell phenotyping during adaptive immune responses.

摘要

T 细胞抗原受体 (TCR) 识别后克隆扩增是适应性免疫反应的一个基本特征。在这里,我们提出了一种通过将针对特定 TCR Vα 和 Vβ 链的抗体与针对 T 细胞激活和分化蛋白的抗体相结合,来利用质谱流式细胞术 (CyTOF) 追踪 T 细胞反应的方法,以在小鼠中进行研究。该策略可识别对李斯特菌、肿瘤和呼吸道流感感染作出反应的 CD8 和 CD4 T 细胞的扩增,这些细胞表达特定的 Vβ 和 Vα 链,并具有不同的分化状态。表达 Vβ 链的扩增 T 细胞群体可直接与李斯特菌、肿瘤细胞或流感的特定抗原识别相关联。在流感感染的情况下,我们发现肌内疫苗接种或恢复期血清转移等常见的治疗方法改变了应答 T 细胞的 TCR 多样性和分化状态。因此,我们提出了一种方法,可在适应性免疫反应过程中监测 TCR 使用的广泛变化,并结合 T 细胞表型进行分析。

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本文引用的文献

1
T cell receptor signaling strength establishes the chemotactic properties of effector CD8 T cells that control tissue-residency.T 细胞受体信号强度决定了效应性 CD8 T 细胞的趋化特性,从而控制组织驻留。
Nat Commun. 2023 Jul 4;14(1):3928. doi: 10.1038/s41467-023-39592-1.
2
Recruitment of epitope-specific T cell clones with a low-avidity threshold supports efficacy against mutational escape upon re-infection.招募具有低亲和力阈值的表位特异性 T 细胞克隆,可支持再次感染时针对突变逃逸的疗效。
Immunity. 2023 Jun 13;56(6):1269-1284.e6. doi: 10.1016/j.immuni.2023.04.010. Epub 2023 May 9.
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Functional T cells are capable of supernumerary cell division and longevity.
功能性 T 细胞具有过剩的细胞分裂和长寿能力。
Nature. 2023 Feb;614(7949):762-766. doi: 10.1038/s41586-022-05626-9. Epub 2023 Jan 18.
4
Temporal single-cell tracing reveals clonal revival and expansion of precursor exhausted T cells during anti-PD-1 therapy in lung cancer.时间分辨单细胞追踪揭示了抗 PD-1 治疗肺癌过程中耗竭前体细胞 T 细胞的克隆复兴和扩增。
Nat Cancer. 2022 Jan;3(1):108-121. doi: 10.1038/s43018-021-00292-8. Epub 2021 Dec 23.
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The precursors of CD8 tissue resident memory T cells: from lymphoid organs to infected tissues.CD8 组织驻留记忆 T 细胞的前体:从淋巴器官到感染组织。
Nat Rev Immunol. 2022 May;22(5):283-293. doi: 10.1038/s41577-021-00590-3. Epub 2021 Sep 3.
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High-throughput and single-cell T cell receptor sequencing technologies.高通量和单细胞 T 细胞受体测序技术。
Nat Methods. 2021 Aug;18(8):881-892. doi: 10.1038/s41592-021-01201-8. Epub 2021 Jul 19.
7
Single-cell analysis by mass cytometry reveals metabolic states of early-activated CD8 T cells during the primary immune response.通过质谱细胞术对单细胞进行分析,揭示了初级免疫反应期间早期激活的 CD8 T 细胞的代谢状态。
Immunity. 2021 Apr 13;54(4):829-844.e5. doi: 10.1016/j.immuni.2021.02.018. Epub 2021 Mar 10.
8
T-cell repertoire analysis and metrics of diversity and clonality.T 细胞受体库分析及多样性和克隆性指标。
Curr Opin Biotechnol. 2020 Oct;65:284-295. doi: 10.1016/j.copbio.2020.07.010. Epub 2020 Sep 2.
9
Convalescent serum therapy for COVID-19: A 19th century remedy for a 21st century disease.新冠康复者血清疗法:一种治疗21世纪疾病的19世纪疗法。
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10
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