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利用qRT-PCR对甘蔗螟虫(鳞翅目:螟蛾科)基因表达分析中内参基因的评估与验证

Evaluation and Validation of Reference Genes for Gene Expression Analysis Using qRT-PCR in the Sugarcane Stem Borer (Lepidoptera: Pyralidae).

作者信息

Wang Zhixiong, Shang Xiankun, Wei Jili, Tian Xiaoli, Liu Yi, Zhang Guohui

机构信息

College of Agriculture, Yangtze University, Jingzhou 434025, China.

Key Laboratory of Sugarcane Biotechnology and Genetic Improvement (Guangxi), Ministry of Agriculture and Rural Affairs/Guangxi Key Laboratory of Sugarcane Genetic Improvement/Sugarcane Research Institute, Guangxi Academy of Agricultural Sciences, Nanning 530007, China.

出版信息

Insects. 2024 Aug 4;15(8):594. doi: 10.3390/insects15080594.

Abstract

(Lepidoptera: Pyralidae) is an economically important sugarcane pest. Although numerous studies were conducted on the physiological responses in , little is known regarding the genes regulating these physiological processes. Gene expression analysis by qRT-PCR can offer a significant indication for functional gene studies. To our knowledge, the reference genes of have not been screened or evaluated, which hinders the functional gene study. In the present study, the stability of seven reference genes (, , , , , , and ) was evaluated in under different experimental conditions, including tissues (antenna, head, thorax, abdomen, leg, and wing), temperatures (4 °C, 25 °C, and 37 °C) and sexes (male and female), through RefFinder, which integrates four algorithms (Normfinder, BestKeeper, ΔCt method, and geNorm). The findings suggested that the combination of and is ideal to analyze gene expressions in different tissues and at distinct temperatures, and and were suitable reference genes for comparing gene expressions between sexes. Finally, the expression profiles of gene were evaluated, and the outcomes further confirm the importance of selecting fitting reference genes for normalization of qRT-PCR data. This study represents the first kind in screening out suitable reference genes for gene expression analysis in . Information from this study is poised to galvanize future inquiry into the gene expression of , an economically important pest of sugarcane.

摘要

(鳞翅目:螟蛾科)是一种对甘蔗具有重要经济影响的害虫。尽管针对[该害虫名称未给出]的生理反应开展了大量研究,但对于调控这些生理过程的基因却知之甚少。通过qRT-PCR进行基因表达分析可为功能基因研究提供重要线索。据我们所知,[该害虫名称未给出]的内参基因尚未经过筛选或评估,这阻碍了功能基因研究。在本研究中,通过整合四种算法(Normfinder、BestKeeper、ΔCt法和geNorm)的RefFinder,在[该害虫名称未给出]的不同实验条件下,包括组织(触角、头部、胸部、腹部、腿部和翅膀)、温度(4℃、25℃和37℃)以及性别(雄性和雌性),对七个内参基因([基因名称未给出])的稳定性进行了评估。研究结果表明,[基因名称未给出]的组合是分析不同组织和不同温度下基因表达的理想选择,而[基因名称未给出]是比较性别间基因表达的合适内参基因。最后,对[基因名称未给出]基因的表达谱进行了评估,结果进一步证实了选择合适的内参基因对qRT-PCR数据进行标准化的重要性。本研究是首次筛选出适合[该害虫名称未给出]基因表达分析的内参基因。本研究所得信息有望推动对[该害虫名称未给出]基因表达的未来研究,[该害虫名称未给出]是甘蔗的一种重要经济害虫。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/c8a6/11354500/0cd5f9f962cb/insects-15-00594-g001.jpg

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