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如何寻找片段:基于片段药物发现中的筛选与验证方法

How to Find a Fragment: Methods for Screening and Validation in Fragment-Based Drug Discovery.

作者信息

Kirkman Tim, Dos Santos Silva Catharina, Tosin Manuela, Bertacine Dias Marcio Vinicius

机构信息

Department of Chemistry, University of Warwick, Gibbet Hill Road, Coventry, CV4 7AL, UK.

Department of Microbiology, Institute of Biomedical Science, University of São Paulo, Av. Prof. Lineu Prestes, 1374, CEP 05508-000, São Paulo, SP, Brazil.

出版信息

ChemMedChem. 2024 Dec 16;19(24):e202400342. doi: 10.1002/cmdc.202400342. Epub 2024 Nov 4.

Abstract

Fragment-based drug discovery (FBDD) is a crucial strategy for developing new drugs that have been applied to diverse targets, from neglected infectious diseases to cancer. With at least seven drugs already launched to the market, this approach has gained interest in both academics and industry in the last 20 years. FBDD relies on screening small libraries with about 1000-2000 compounds of low molecular weight (about 300 Da) using several biophysical methods. Because of the reduced size of the compounds, the chemical space and diversity can be better explored than large libraries used in high throughput screenings. This review summarises the most common biophysical techniques used in fragment screening and orthogonal validation. We also explore the advantages and drawbacks of the different biophysical techniques and examples of applications and strategies.

摘要

基于片段的药物发现(FBDD)是开发新药的关键策略,已应用于从被忽视的传染病到癌症等多种靶点。随着至少七种药物已投放市场,在过去20年中,这种方法已引起学术界和工业界的关注。FBDD依靠使用几种生物物理方法筛选含有约1000 - 2000种低分子量(约300Da)化合物的小型文库。由于化合物尺寸减小,与高通量筛选中使用的大型文库相比,可以更好地探索化学空间和多样性。本综述总结了片段筛选和正交验证中最常用的生物物理技术。我们还探讨了不同生物物理技术的优缺点以及应用和策略示例。

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