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用多粘菌素B抑制医院细菌:计算机基因挖掘与体外分析

Nosocomial Bacteria Inhibition with Polymyxin B: In Silico Gene Mining and In Vitro Analysis.

作者信息

Chunduru Jayendra, LaRoe Nicholas, Garza Jeremy, Hamood Abdul N, Paré Paul W

机构信息

Chemistry & Biochemistry Department, Texas Tech University, Lubbock, TX 79409, USA.

Department of Immunology & Molecular Microbiology, Texas Tech University Health Sciences Center, Lubbock, TX 79430, USA.

出版信息

Antibiotics (Basel). 2024 Aug 8;13(8):745. doi: 10.3390/antibiotics13080745.

Abstract

Multidrug-resistant bacteria present a significant public health challenge; such pathogens exhibit reduced susceptibility to conventional antibiotics, limiting current treatment options. Cationic non-ribosomal peptides (CNRPs) such as brevicidine and polymyxins have emerged as promising candidates to block Gram-negative bacteria. To investigate the capability of bacteria to biosynthesize CNRPs, and specifically polymyxins, over 11,000 bacterial genomes were mined in silico. was identified as having a robust biosynthetic capacity, based on multiple polymyxin gene clusters. biosynthetic competence was confirmed by metabolite characterization via HPLC purification and MALDI TOF/TOF analysis. When grown in a selected medium, the metabolite yield was 4 mg/L with a 20-fold specific activity increase. Polymyxin B (PMB) was assayed with select nosocomial pathogens, including , , and , which exhibited minimum inhibitory concentrations of 4, 1, and 1 µg/mL, respectively.

摘要

多重耐药菌对公共卫生构成重大挑战;此类病原体对传统抗生素的敏感性降低,限制了当前的治疗选择。阳离子非核糖体肽(CNRPs)如短杆菌肽和多粘菌素已成为对抗革兰氏阴性菌的有前景的候选物。为了研究细菌生物合成CNRPs,特别是多粘菌素的能力,对超过11000个细菌基因组进行了计算机挖掘。基于多个多粘菌素基因簇,某菌株被确定具有强大的生物合成能力。通过高效液相色谱纯化和基质辅助激光解吸电离飞行时间/飞行时间质谱分析对代谢产物进行表征,证实了该菌株的生物合成能力。当在选定培养基中生长时,代谢产物产量为4mg/L,比活性提高了20倍。用选定的医院病原体对多粘菌素B(PMB)进行了检测,包括某菌、某菌和某菌,它们的最低抑菌浓度分别为4、1和1μg/mL。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/4071/11350920/d729d7e426e0/antibiotics-13-00745-g001a.jpg

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