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DNA刺激SIRT6对组氨酸重复序列中的蛋白质进行单ADP核糖基化修饰。

DNA stimulates SIRT6 to mono-ADP-ribosylate proteins within histidine repeats.

作者信息

Pederson Nicholas J, Diehl Katharine L

出版信息

bioRxiv. 2024 Jul 31:2024.07.31.606047. doi: 10.1101/2024.07.31.606047.

DOI:10.1101/2024.07.31.606047
PMID:39211154
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11361027/
Abstract

Sirtuins are the NAD -dependent class III lysine deacylases (KDACs). Members of this family have been linked to longevity and a wide array of different diseases, motivating the pursuit of sirtuin modulator compounds. Sirtuin 6 (SIRT6) is a primarily nuclear KDAC that deacetylates histones to facilitate gene repression. In addition to this canonical post-translational modification (PTM) "eraser" function, SIRT6 can use NAD instead to "write" mono-ADP-ribosylation (mARylation) on target proteins. This enzymatic function has been primarily associated with SIRT6's role in the DNA damage response. This modification has been challenging to study because it is not clear under what precise cellular contexts it occurs, only a few substrates are known, and potential interference from other ADP-ribosyltransferases in cells, among other reasons. In this work, we used commercially available ADP-ribosylation detection reagents to investigate the mARylation activity of SIRT6 in a reconstituted system. We observed that SIRT6 is activated in its mARylation activity by binding to dsDNA ends. We further identified a surprising target motif within biochemical substrates of SIRT6, polyhistidine (polyHis) repeat tracts, that are present in several previously identified SIRT6 mARylation substrates and binding partners. This work provides important context for SIRT6 mARylation activity, in contrast to its KDAC activity, and proposes that SIRT6 is a histidine mARyltransferase enzyme.

摘要

沉默调节蛋白是依赖烟酰胺腺嘌呤二核苷酸(NAD⁺)的Ⅲ类赖氨酸脱酰基酶(KDACs)。该家族成员与寿命延长以及多种不同疾病相关,这促使人们对沉默调节蛋白调节剂化合物进行探索。沉默调节蛋白6(SIRT6)是一种主要存在于细胞核中的KDAC,它使组蛋白去乙酰化以促进基因抑制。除了这种典型的翻译后修饰(PTM)“擦除器”功能外,SIRT6还可以利用NAD⁺在靶蛋白上“写入”单磷酸腺苷核糖基化(mARylation)。这种酶促功能主要与SIRT6在DNA损伤反应中的作用相关。这种修饰一直难以研究,原因包括不清楚它在何种精确的细胞环境中发生、已知的底物很少以及细胞中其他ADP核糖基转移酶可能产生的干扰等。在这项工作中,我们使用市售的ADP核糖基化检测试剂,在一个重组系统中研究SIRT6的mARylation活性。我们观察到SIRT6通过与双链DNA末端结合而激活其mARylation活性。我们进一步在SIRT6的生化底物多组氨酸(polyHis)重复序列中鉴定出一个令人惊讶的靶基序,该基序存在于先前鉴定的几种SIRT6 mARylation底物和结合伴侣中。这项工作为SIRT6的mARylation活性(与其KDAC活性不同)提供了重要背景,并提出SIRT6是一种组氨酸mARyl转移酶。