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循环环状 RNA 作为新型生物标志物及其在脑卒中后认知障碍早期诊断中的功能预测作用:一项中国单中心前瞻性研究。

Circulating circular RNAs as novel biomarkers and functional prediction for the early diagnosis in post-stroke cognitive impairment: A single-center prospective study in China.

机构信息

Department of Neurology, The First Affiliated Hospital of Soochow University; Department of Hyperbaric Oxygen, The First Affiliated Hospital of Wannan Medical College (Yijishan Hospital of Wannan Medical College).

Department of Radiology, The First Affiliated Hospital of Wannan Medical College (Yijishan Hospital of Wannan Medical College).

出版信息

J Stroke Cerebrovasc Dis. 2024 Nov;33(11):107945. doi: 10.1016/j.jstrokecerebrovasdis.2024.107945. Epub 2024 Aug 29.

Abstract

BACKGROUND

Early evaluation and intervention for post-stroke cognitive impairment are crucial for improving the prognosis of acute ischemic stroke. The search for specific diagnostic markers and feasible therapeutic targets is extremely urgent.The characteristics of circular RNAs make them promising candidates.

AIMS

To screen circular RNAs as novel biomarkers and therapeutic targets for post-stroke cognitive impairment in large-artery atherosclerosis anterior circulation cerebral infarction patients.

METHODS

In this prospective observational study, patients with first-ever large-artery atherosclerosis anterior circulation cerebral infarction were recruited. The Montreal Cognitive Assessment was used to assess the cognitive statuses of patients. Venous blood samples were collected on the seventh day after stroke onset. A circRNA microarray was used to identify differentially expressed circular RNAs in the discovery cohort (four patients with post-stroke cognitive impairment and four patients with post-stroke cognitive normal characteristics), and validation was performed in the validation cohorts (45 patients with post-stroke cognitive impairment and 30 patients with post-stroke cognitive normal characteristics) using quantitative real-time polymerase chain reaction. Receiver operating characteristic curves of the validated circular RNAs and the NIHSS score were constructed, and the area under the curve, sensitivity, and specificity were calculated. Correlation analysis was performed to explore the relationship between the copy number of circular RNAs and the cognitive status. The functions of the differentially expressed circular RNAs were predicted using bioinformatics analysis.

RESULTS

CircRNA microarray analysis revealed 189 human circular RNAs (152 upregulated and 37 downregulated) that were differentially expressed in the plasma samples of patients with post-stroke cognitive impairment and PSCN characteristics. The expression of hsa_circ_0089763, hsa_circ_0064644, and hsa_circ_0089762 was validated using quantitative real-time polymerase chain reaction. The area under the curve, sensitivity, and specificity of hsa_circ_0089762 in post-stroke cognitive impairment diagnosis were 0.993, 97.8%, and 96.7%, respectively, and the correlation coefficient between hsa_circ_0089762 expression and the Montreal Cognitive Assessment score was -0.693 (p < 0.001), which made it an ideal biomarker. Bioinformatic analysis revealed that the targeted mRNAs of the three circular RNAs were enriched in pathologically related signaling pathways of post-stroke cognitive impairment, such as the MAPK and PI3K-Akt signaling pathways. Based on the circRNA-miRNA-mRNA network, the three circular RNAs play a crucial role in numerous pathological processes of acute ischemic stroke and post-stroke cognitive impairment by sponging miRNAs such as MiR-335, MiR-424, and MiR-670. By building the protein-protein interaction network, we identified cluster 1 according to the MCODE score; cluster 1 was composed of ERBB4, FGFR1, CACNA2D1, NRG1, PPP2R5E, CACNB4, CACNB2, CCND1, NTRK2, and PTCH.

CONCLUSION

Hsa_circ_0089762, hsa_circ_0064644, and hsa_circ_0089763 are potential novel biomarkers and focal points for exploring intervention targets in post-stroke cognitive impairment of large-artery atherosclerosis anterior circulation cerebral infarction patients.

REGISTRATION NUMBER

ChiCTR2000035074.

摘要

背景

早期评估和干预卒中后认知障碍对于改善急性缺血性卒中患者的预后至关重要。寻找特定的诊断标志物和可行的治疗靶点是极其紧迫的。环状 RNA 的特征使其成为有前途的候选者。

目的

筛选环状 RNA 作为大动脉粥样硬化性前循环脑梗死患者卒中后认知障碍的新型生物标志物和治疗靶点。

方法

在这项前瞻性观察性研究中,招募了首次发生大动脉粥样硬化性前循环脑梗死的患者。采用蒙特利尔认知评估量表评估患者的认知状态。在卒中发病后第 7 天采集静脉血样本。采用环状 RNA 微阵列鉴定发现队列(4 例卒中后认知障碍患者和 4 例卒中后认知正常特征患者)中差异表达的环状 RNA,并在验证队列(45 例卒中后认知障碍患者和 30 例卒中后认知正常特征患者)中采用实时定量聚合酶链反应进行验证。构建验证的环状 RNA 和 NIHSS 评分的受试者工作特征曲线,并计算曲线下面积、灵敏度和特异性。进行相关性分析,以探讨环状 RNA 拷贝数与认知状态之间的关系。采用生物信息学分析预测差异表达的环状 RNA 的功能。

结果

环状 RNA 微阵列分析显示,在卒中后认知障碍和 PSCN 特征患者的血浆样本中,有 189 种人类环状 RNA(152 种上调和 37 种下调)差异表达。采用实时定量聚合酶链反应验证了 hsa_circ_0089763、hsa_circ_0064644 和 hsa_circ_0089762 的表达。hsa_circ_0089762 用于卒中后认知障碍诊断的曲线下面积、灵敏度和特异性分别为 0.993、97.8%和 96.7%,hsa_circ_0089762 表达与蒙特利尔认知评估评分之间的相关系数为-0.693(p < 0.001),使其成为理想的生物标志物。生物信息学分析显示,这三个环状 RNA 的靶向 mRNAs 富集在卒中后认知障碍的病理相关信号通路中,如 MAPK 和 PI3K-Akt 信号通路。基于环状 RNA-miRNA-mRNA 网络,三个环状 RNA 通过海绵吸附 MiR-335、MiR-424 和 MiR-670 等 miRNA,在急性缺血性卒中和卒中后认知障碍的许多病理过程中发挥关键作用。通过构建蛋白质-蛋白质相互作用网络,我们根据 MCODE 评分确定了第 1 个簇;第 1 个簇由 ERBB4、FGFR1、CACNA2D1、NRG1、PPP2R5E、CACNB4、CACNB2、CCND1、NTRK2 和 PTCH 组成。

结论

hsa_circ_0089762、hsa_circ_0064644 和 hsa_circ_0089763 是大动脉粥样硬化性前循环脑梗死患者卒中后认知障碍的潜在新型生物标志物和探索干预靶点的焦点。

登记号

ChiCTR2000035074。

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