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利用随机回归测定日模型预测整个泌乳期的体况评分

Prediction of body condition score throughout lactation by random regression test-day models.

作者信息

Atashi H, Chen Y, Chelotti J, Lemal P, Gengler N

机构信息

TERRA Teaching and Research Center, Gembloux Agro-Bio Tech, University of Liège, Gembloux, Belgium.

Department of Animal Science, Shiraz University, Shiraz, Iran.

出版信息

J Anim Breed Genet. 2025 Mar;142(2):214-222. doi: 10.1111/jbg.12890. Epub 2024 Aug 31.

DOI:10.1111/jbg.12890
PMID:39215547
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11812077/
Abstract

Regular monitoring of body condition score (BCS) changes during lactation is a crucial management tool in dairy cattle; however, the current BCS measurements are often discontinuous and unevenly spaced in time. The aim of this study was to investigate the ability of random regression test-day models (RR-TDM) to predict BCS for the entire lactation in dairy cows even if the actual scoring is limited to one BCS record. The data consisted of test-day records of milk yield (MY), fat percentage (FP), protein percentage (PP) and BCS (based on a 9-point scale with unit increments; 1-9) collected from 2014 to 2022 in 128 herds in the Walloon Region of Belgium. In total, 20,698 test-day records on 2166 first-parity Holstein cows (2-12 with an average of 9.42 test-day records per cow) were available for MY, FP and PP; and 7985 records on the same animals (2-12 with an average of 3.68 records per cow) were available for BCS. To estimate the solutions, only one randomly selected BCS record per animal along with all her MY, FP and PP records were used, which were then used to predict BCS data (calibration set). The remaining BCS (1-11 with an average 2.86 BCS records per animal) were used to evaluate the goodness of the predictions (validation set). Multiple-trait RR-TDM was used to estimate (co)variance components through the average information restricted maximum likelihood (AI-REML) algorithm. Predicted BCS were grouped into nine classes as the original observed BCS used for comparison. Pearson correlation between the predicted and observed BCS, prediction error (PE), absolute prediction error (APE) and root mean squared prediction error (RMSE) were calculated. Mean (standard deviation; SD) BCS was 4.97 (1.01), 4.95 (1.07) and 4.98 (1.00) BCS units in the full, calibration and validation datasets, respectively. Pearson correlation between the observed and predicted BCS was 0.71, mean (SD) PE was 0.04 (0.52) BCS units, mean (SD) APE was 0.48 (0.53) BCS units and RMSE was 0.72 BCS units. These findings demonstrate the ability of RR-TDM to predict BCS for the entire lactation using a single BCS record along with available test-day records of milk yield and composition in Holstein dairy cows.

摘要

在奶牛养殖中,定期监测泌乳期的体况评分(BCS)变化是一项至关重要的管理工具;然而,目前的BCS测量往往是不连续的,且在时间上间隔不均。本研究的目的是调查随机回归测定日模型(RR-TDM)预测奶牛整个泌乳期BCS的能力,即使实际评分仅限于一条BCS记录。数据包括2014年至2022年在比利时瓦隆地区128个牛群中收集的测定日产奶量(MY)、乳脂率(FP)、乳蛋白率(PP)和BCS(基于9分制,单位增量为1;1 - 9)的记录。总共获得了2166头头胎荷斯坦奶牛的20698条测定日记录(每头牛2 - 12条记录,平均每头牛9.42条测定日记录)用于MY、FP和PP;以及同一批奶牛的7985条记录(每头牛2 - 12条记录,平均每头牛3.68条记录)用于BCS。为了估计参数,每头动物仅随机选择一条BCS记录以及其所有的MY、FP和PP记录,然后用于预测BCS数据(校准集)。其余的BCS记录(每头动物1 - 11条记录,平均每头牛2.86条BCS记录)用于评估预测的准确性(验证集)。多性状RR-TDM通过平均信息约束最大似然(AI-REML)算法估计(协)方差分量。预测的BCS被分为九个类别,与原始观察到的BCS进行比较。计算预测BCS与观察到的BCS之间的皮尔逊相关性、预测误差(PE)、绝对预测误差(APE)和均方根预测误差(RMSE)。完整数据集、校准数据集和验证数据集中的平均(标准差;SD)BCS分别为4.97(1.01)、4.95(1.07)和4.98(1.00)个BCS单位。观察到的和预测的BCS之间的皮尔逊相关性为0.71,平均(SD)PE为0.04(0.52)个BCS单位,平均(SD)APE为0.48(0.53)个BCS单位,RMSE为0.72个BCS单位。这些结果表明,RR-TDM能够利用一条BCS记录以及荷斯坦奶牛测定日产奶量和成分的可用记录来预测整个泌乳期的BCS。

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本文引用的文献

1
Estimation of body condition score change in dairy cows in a seasonal calving pasture-based system using routinely available milk mid-infrared spectra and machine learning techniques.利用常规可用的牛奶中红外光谱和机器学习技术估算季节性放牧奶牛的体况评分变化。
J Dairy Sci. 2023 Jun;106(6):4232-4244. doi: 10.3168/jds.2022-22394. Epub 2023 Apr 25.
2
Assessing whether dairy cow welfare is "better" in pasture-based than in confinement-based management systems.评估在基于牧场的管理系统中奶牛福利是否比在圈养管理系统中“更好”。
N Z Vet J. 2020 May;68(3):168-177. doi: 10.1080/00480169.2020.1721034. Epub 2020 Feb 20.
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Assessing and managing body condition score for the prevention of metabolic disease in dairy cows.
评估和管理奶牛身体状况评分,以预防代谢疾病。
Vet Clin North Am Food Anim Pract. 2013 Jul;29(2):323-36. doi: 10.1016/j.cvfa.2013.03.003. Epub 2013 May 31.
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Interrater reliability: the kappa statistic.组内一致性:kappa 统计量。
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Body condition score and body weight effects on dystocia and stillbirths and consequent effects on postcalving performance.体况评分和体重对难产及死胎的影响以及对产犊后性能的后续影响。
J Dairy Sci. 2007 Sep;90(9):4201-11. doi: 10.3168/jds.2007-0023.
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Relationships among body condition score, body weight, and milk production variables in pasture-based dairy cows.以牧场为基础的奶牛的体况评分、体重和产奶量变量之间的关系。
J Dairy Sci. 2007 Aug;90(8):3802-15. doi: 10.3168/jds.2006-740.
9
Prediction of daily milk, fat, and protein production by a random regression test-day model.利用随机回归测定日模型预测每日产奶量、乳脂产量和蛋白质产量
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Correlations among body condition scores from various sources, dairy form, and cow health from the United States and Denmark.美国和丹麦不同来源的体况评分、奶牛体型以及奶牛健康之间的相关性。
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