Department of Human Genetics, Leiden University Medical Center, Leiden 2333AL, the Netherlands.
Department of Health Sciences and Technology, ETH Zürich, Zürich, 8092, Switzerland.
DNA Repair (Amst). 2024 Oct;142:103755. doi: 10.1016/j.dnarep.2024.103755. Epub 2024 Aug 25.
By replicating damaged nucleotides, error-prone DNA translesion synthesis (TLS) enables the completion of replication, albeit at the expense of fidelity. TLS of helix-distorting DNA lesions, that usually have reduced capacity of basepairing, comprises insertion opposite the lesion followed by extension, the latter in particular by polymerase ζ (Pol ζ). However, little is known about involvement of Pol ζ in TLS of non- or poorly-distorting, but miscoding, lesions such as O-methyldeoxyguanosine (O-medG). Using purified Pol ζ we describe that the enzyme can misincorporate thymidine opposite O-medG and efficiently extend from terminal mismatches, suggesting its involvement in the mutagenicity of O-medG. Surprisingly, O6-medG lesions induced by the methylating agent N-methyl-N'-nitro-N-nitrosoguanidine (MNNG) appeared more, rather than less, mutagenic in Pol ζ-deficient mouse embryonic fibroblasts (MEFs) than in wild type MEFs. This suggested that in vivo Pol ζ participates in non-mutagenic TLS of O-medG. However, we found that the Pol ζ-dependent misinsertions at O-medG lesions are efficiently corrected by DNA mismatch repair (MMR), which masks the error-proneness of Pol ζ. We also found that the MNNG-induced mutational signature is determined by the adduct spectrum, and modulated by MMR. The signature mimicked single base substitution signature 11 in the catalogue of somatic mutations in cancer, associated with treatment with the methylating drug temozolomide. Our results unravel the individual roles of the major contributors to methylating drug-induced mutagenesis. Moreover, these results warrant caution as to the classification of TLS as mutagenic or error-free based on in vitro data or on the analysis of mutations induced in MMR-proficient cells.
通过复制受损的核苷酸,易错的 DNA 跨损伤合成(TLS)能够完成复制,尽管是以保真度为代价。螺旋扭曲 DNA 损伤的 TLS,通常具有降低的碱基配对能力,包括在损伤物的对面进行插入,然后进行延伸,后者特别是由聚合酶 ζ(Pol ζ)进行。然而,对于非扭曲或扭曲程度较小但具有致错性的损伤,例如 O-甲基脱氧鸟苷(O-medG),Pol ζ 是否参与 TLS 知之甚少。使用纯化的 Pol ζ,我们描述了该酶可以在 O-medG 对面错误掺入胸腺嘧啶,并有效地从末端错配延伸,这表明它参与了 O-medG 的致突变性。令人惊讶的是,与野生型 MEFs 相比,在缺乏 Pol ζ 的小鼠胚胎成纤维细胞(MEFs)中,由甲基化剂 N-甲基-N'-硝基-N-亚硝基胍(MNNG)诱导的 O6-medG 损伤似乎更具,而不是更少,致突变性。这表明 Pol ζ 在体内参与非致突变性的 O-medG TLS。然而,我们发现 Pol ζ 在 O-medG 损伤处的依赖性错误插入被 DNA 错配修复(MMR)有效地纠正,这掩盖了 Pol ζ 的易错性。我们还发现,MNNG 诱导的突变特征由加合物谱决定,并受 MMR 调节。该特征模拟了癌症体细胞突变目录中的单碱基替换特征 11,与甲基化药物替莫唑胺的治疗相关。我们的结果揭示了导致甲基化药物诱导突变的主要因素的个体作用。此外,这些结果表明,基于体外数据或在 MMR 功能正常的细胞中诱导的突变分析,将 TLS 归类为致突变或无错误是需要谨慎的。