Department of Bioinformatics and Biotechnology, Government College University Faisalabad (GCUF), Faisalabad, Pakistan.
Curr Pharm Des. 2024;30(36):2882-2895. doi: 10.2174/0113816128332400240827061932.
serovar Enteritidis and serovar Typhimurium are among the main causative agents of nontyphoidal Salmonella infections, imposing a significant global health burden. The emergence of antibiotic resistance in these pathogens underscores the need for innovative therapeutic strategies.
To identify proteins as potential drug targets against and Salmonella Typhimurium serovars using approaches.
In this study, a subtractive genomics approach was employed to identify potential drug targets. The whole proteome of PT4 and (D23580), containing 393 and 478 proteins, respectively, was analyzed through subtractive genomics to identify human homologous proteins of the pathogen and also the proteins linked to shared metabolic pathways of pathogen and its host.
Subsequent analysis revealed 19 common essential proteins shared by both strains. To ensure hostspecificity, we identified 10 non-homologous proteins absent in humans. Among these proteins, peptidoglycan glycosyltransferase FtsI was pivotal, participating in pathogen-specific pathways and making it a promising drug target. Molecular docking highlighted two potential compounds, Balsamenonon A and 3,3',4',7-Tetrahydroxyflavylium, with strong binding affinities with FtsI. A 100 ns molecular dynamics simulation having 10,000 frames substantiated the strong binding affinity and demonstrated the enduring stability of the predicted compounds at the docked site.
The findings in this study provide the foundation for drug development strategies against Salmonella infections, which can contribute to the prospective development of natural and cost-effective drugs targeting and .
肠炎沙门氏菌和鼠伤寒沙门氏菌是引起非伤寒型沙门氏菌感染的主要病原体之一,给全球健康带来了重大负担。这些病原体对抗生素的耐药性的出现突显了需要创新的治疗策略。
使用消减基因组学方法鉴定针对肠炎沙门氏菌和鼠伤寒沙门氏菌血清型的潜在药物靶标。
在这项研究中,使用消减基因组学方法来鉴定潜在的药物靶标。分析了 PT4 和 (D23580)的全蛋白质组,分别包含 393 和 478 种蛋白质,通过消减基因组学来识别病原体和宿主共享代谢途径的人类同源蛋白和相关蛋白。
随后的分析显示,两种菌株共有 19 种共同的必需蛋白。为了确保宿主特异性,我们鉴定出 10 种在人类中不存在的非同源蛋白。在这些蛋白质中,肽聚糖糖基转移酶 FtsI 是至关重要的,它参与病原体特异性途径,使其成为一个有前途的药物靶标。分子对接突出了两种具有强结合亲和力的潜在化合物,Balsamenonon A 和 3,3',4',7-四羟基黄酮,与 FtsI 具有强结合亲和力。具有 10,000 个帧的 100 ns 分子动力学模拟证实了预测化合物在对接部位的强结合亲和力和持久稳定性。
本研究的结果为针对沙门氏菌感染的药物开发策略提供了基础,这有助于针对 和 开发天然和具有成本效益的药物。