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动态调控同源重组可实现. 的精确基因组编辑。

Dynamically Regulating Homologous Recombination Enables Precise Genome Editing in .

机构信息

Division of Biotechnology, Dalian Institute of Chemical Physics, Chinese Academy of Sciences, 457 Zhongshan Road, Dalian 116023, PR China.

School of Biological Engineering, Dalian Polytechnic University, Dalian 116034, China.

出版信息

ACS Synth Biol. 2024 Sep 20;13(9):2938-2947. doi: 10.1021/acssynbio.4c00349. Epub 2024 Sep 4.

Abstract

Methylotrophic yeast has become a promising cell factory due to its efficient utilization of methanol to produce high value-added chemicals. However, the low homologous recombination (HR) efficiency in greatly hinders extensive metabolic engineering for industrial applications. Overexpression of HR-related genes successfully improved HR efficiency, which however brought cellular stress and reduced chemical production due to constitutive expression of the HR-related gene. Here, we engineered an HR repair pathway using the dynamically regulated gene under the control of the l-rhamnose-induced promoter P based on the previously constructed CRISPR-Cas9 system in . Under the optimal inducible conditions, the appropriate expression level of achieved up to 60% of HR rates without any detectable influence on cell growth in methanol, which was 10-fold higher than that of the wild-type strain. While adopting as the chassis strain for bioproductions, the dynamically regulated recombination system had 50% higher titers of fatty alcohols than that static regulation system. Therefore, this study provided a feasible platform in for convenient genetic manipulation without perturbing cellular fitness.

摘要

甲醇营养型酵母由于能够高效利用甲醇生产高附加值化学品,因此成为一种很有前途的细胞工厂。然而,其同源重组(HR)效率低极大地限制了其在工业应用中的广泛代谢工程。HR 相关基因的过表达成功提高了 HR 效率,但由于 HR 相关基因的组成型表达,会带来细胞应激并降低化学品的产量。在这里,我们在之前构建的 CRISPR-Cas9 系统的基础上,利用 l-鼠李糖诱导启动子 P 控制的动态调控基因 构建了 HR 修复途径。在最优诱导条件下,达到了高达 60%的 HR 率,而对甲醇中细胞生长没有任何可检测的影响,比野生型菌株高 10 倍。在将 作为生物生产底盘菌株时,动态调控重组系统的脂肪醇产量比静态调控系统高 50%。因此,这项研究为在不影响细胞适应性的情况下进行方便的遗传操作提供了一个可行的平台。

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