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[嗅神经母细胞瘤的基因组图谱与免疫微环境]

[Genomic profiles and immune microenvironment of olfactory neuroblastoma].

作者信息

Yang Y Y, Liu H G, Li Y H, Li X C, Piao Y S

机构信息

Beijing Key Laboratory of Molecular Diagnosis of Head and Neck Pathology, Department of Pathology, Beijing Tongren Hospital, Capital Medical University, Beijing 100730, China.

出版信息

Zhonghua Bing Li Xue Za Zhi. 2024 Sep 8;53(9):916-921. doi: 10.3760/cma.j.cn112151-20240324-00190.

Abstract

To investigate the genomic profiles and immune microenvironment of olfactory neuroblastoma (ONB). Nineteen ONB cases diagnosed in the Beijing Tongren Hospital from May 2018 to October 2022 were divided into low-grade and high-grade groups according to the Hyams grading system, including 7 low-grade and 12 high-grade ONB. Whole exome sequencing and multiplex immunofluorescence analyses were performed on tissue samples of these ONB. A total of 929 nonsynonymous alterations were identified in 18 of the 19 ONB (18/19) cases. The most commonly altered cancer-related genes were CTNNB1 (3/19) and ZNRF3 (3/19). The most mutated oncogenic pathways were the WNT and RAS pathways. The median tumor mutation burden (TMB) was 0.45/Mb, ranging from 0 to 3.25. The median tumor neoantigen load (TNB) was 9.39 neoantigens/Mb, ranging from 0 to 38.30. The median allelic mutation tumor heterogeneity (MATH) score was 16.95, ranging from 3.05 to 117.47. Only one of the 19 cases expressed PD-L1 (composite positive score, CPS>1) in the tumor cells. The median percentage of CD8 tumor-infiltrating lymphocyte (TIL) in the tumor region was 1.08%. No significant differences were observed between the low-and high-grade groups for mutant genes, mutant pathways, TMB, TNB, MATH, PD-L1 expression levels, or CD8 TILs percentage(>0.05). However, the low-grade group showed significantly more CD68 macrophages in both the tumor and total region than the high-grade group. Notably, CD68CD163 macrophages accounted for an average of 80.52% of CD68 macrophages. CTNNB1 and ZNRF3 are the most commonly altered cancer-related genes. The low expression of PD-L1 and the low percentage of CD8 TIL indicate that ONB might not be sensitive to immunotherapy. The percentage of M1-type macrophages in low-grade ONB is significantly higher than that in high-grade ONB, suggesting that M1-type macrophages may be involved in the progression of ONB from low-grade to high-grade.

摘要

研究嗅神经母细胞瘤(ONB)的基因组特征和免疫微环境。将2018年5月至2022年10月在北京同仁医院确诊的19例ONB病例,根据海姆斯分级系统分为低级别组和高级别组,其中低级别ONB 7例,高级别ONB 12例。对这些ONB的组织样本进行全外显子测序和多重免疫荧光分析。在19例ONB病例中的18例(18/19)共鉴定出929个非同义改变。最常发生改变的癌症相关基因是CTNNB1(3/19)和ZNRF3(3/19)。最常发生突变的致癌途径是WNT和RAS途径。肿瘤突变负荷(TMB)中位数为0.45/Mb,范围为0至3.25。肿瘤新抗原负荷(TNB)中位数为9.39个新抗原/Mb,范围为0至38.30。等位基因突变肿瘤异质性(MATH)评分中位数为16.95,范围为3.05至117.47。19例病例中只有1例肿瘤细胞表达PD-L1(综合阳性评分,CPS>1)。肿瘤区域CD8肿瘤浸润淋巴细胞(TIL)的百分比中位数为1.08%。低级别组和高级别组在突变基因、突变途径、TMB、TNB、MATH、PD-L1表达水平或CD8 TILs百分比方面未观察到显著差异(P>0.05)。然而,低级别组在肿瘤和整体区域的CD68巨噬细胞均显著多于高级别组。值得注意的是,CD68⁺CD163⁻巨噬细胞平均占CD68巨噬细胞的80.52%。CTNNB1和ZNRF3是最常发生改变的癌症相关基因。PD-L1低表达和CD8 TIL百分比低表明ONB可能对免疫治疗不敏感。低级别ONB中M1型巨噬细胞的百分比显著高于高级别ONB,提示M1型巨噬细胞可能参与ONB从低级别向高级别的进展。

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