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发现带有吡唑/恶二唑部分的香豆素支架新型分子杂化衍生物:分子对接、偏光显微镜分析、计算机模拟药代动力学以及体外抗菌评估,并鉴定强效抗肿瘤药效团位点。

Discovery of new molecular hybrid derivatives with coumarin scaffold bearing pyrazole/oxadiazole moieties: Molecular docking, POM analyses, in silico pharmacokinetics and in vitro antimicrobial evaluation with identification of potent antitumor pharmacophore sites.

作者信息

Tataringa Gabriela, Tuchilus Cristina, Ahmed Mukhtar, Ahmed Sumeer, Bhat Ajmal R, Ben Hadda Taibi, Zbancioc Ana-Maria, Fahelelbom Khairi M

机构信息

University of Medicine and Pharmacy Grigore T. Popa Iasi, Romania.

Department of Zoology, College of Science, King Saud University, P. O. Box 2455, Riyadh 11451, Kingdom of Saudi Arabia.

出版信息

Bioorg Chem. 2024 Dec;153:107761. doi: 10.1016/j.bioorg.2024.107761. Epub 2024 Aug 30.


DOI:10.1016/j.bioorg.2024.107761
PMID:39241586
Abstract

This synthetic organic methodology involves the creation of novel coumarin-based hybrids of series (1-4) with pyrazole ring and (5-8) with oxadiazole moiety. The targeted compounds were tested for In vitro Antimicrobial efficacy against Staphylococcus aureus, Escherichia coli, Pseudomonas aeruginosa, and Candida albicans pathogenic microbes using disc diffusion and broth microdilution with ciprofloxacin and fluconazole as reference standards. Density functional theory (DFT) studies were used to study atomic structure and reactivity, including absolute electronegativity (χ), electrophilicity (ω), electron acceptor (ω+), donor capabilities (ω-), electron affinity (EA), energy gap (ΔE), global hardness (η), global softness (S), and ionisation potential (IP) and FMOs, NBOs, MEP, and Mulliken Charge analysis. The POM tests found three integrated pharmacophore sites with antibacterial, antiviral, and anticancer activities. Molecular docking studies are also used to determine the S. aureus nucleoside diphosphate kinase receptor's affinity and mode of action for the synthesized drugs. In silico analysis of thermodynamic and therapeutic effectiveness properties, including Lipinski's 'rule of five', Veber's rule, and ADME properties, predicted toxicity-free, non-carcinogenic, and risk-free oral administration of the synthesized complexes.

摘要

这种合成有机方法涉及创建具有吡唑环的系列(1-4)和具有恶二唑部分的系列(5-8)的新型香豆素基杂化物。使用纸片扩散法和肉汤微量稀释法,以环丙沙星和氟康唑作为参考标准,对目标化合物针对金黄色葡萄球菌、大肠杆菌、铜绿假单胞菌和白色念珠菌等致病微生物进行了体外抗菌功效测试。密度泛函理论(DFT)研究用于研究原子结构和反应性,包括绝对电负性(χ)、亲电性(ω)、电子受体(ω+)、供体能力(ω-)、电子亲和能(EA)、能隙(ΔE)、全局硬度(η)、全局软度(S)、电离势(IP)以及前线分子轨道(FMOs)、自然键轨道(NBOs)、分子静电势(MEP)和 Mulliken 电荷分析。POM 测试发现了三个具有抗菌、抗病毒和抗癌活性的整合药效团位点。分子对接研究还用于确定合成药物对金黄色葡萄球菌核苷二磷酸激酶受体的亲和力和作用方式。对包括 Lipinski 的“五规则”、Veber 规则和药物代谢动力学性质(ADME)在内的热力学和治疗有效性性质进行的计算机模拟分析预测,合成的配合物口服给药无毒性、无致癌性且无风险。

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