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五种森林病原性疫霉属真菌聚乙二醇介导质粒转化建立的异质性。

Heterogeneity in establishment of polyethylene glycol-mediated plasmid transformations for five forest pathogenic Phytophthora species.

机构信息

Department of Forest & Conservation Sciences, Faculty of Forestry, University of British Columbia, Vancouver, British Columbia, Canada.

Institut de Biologie Intégrative et des Systèmes (IBIS), Université Laval, Québec City, Québec, Canada.

出版信息

PLoS One. 2024 Sep 10;19(9):e0306158. doi: 10.1371/journal.pone.0306158. eCollection 2024.

Abstract

Plasmid-mediated DNA transformation is a foundational molecular technique and the basis for most CRISPR-Cas9 gene editing systems. While plasmid transformations are well established for many agricultural Phytophthora pathogens, development of this technique in forest Phytophthoras is lacking. Given our long-term research objective to develop CRISPR-Cas9 gene editing in a forest pathogenic Phytophthora species, we sought to establish the functionality of polyethylene glycol (PEG)-mediated plasmid transformation in five species: P. cactorum, P. cinnamomi, P. cryptogea, P. ramorum, and P. syringae. We used the agricultural pathogen P. sojae, a species for which PEG-mediated transformations are well-established, as a transformation control. Using a protocol previously optimized for P. sojae, we tested transformations in the five forest Phytophthoras with three different plasmids: two developed for CRISPR-Cas9 gene editing and one developed for fluorescent protein tagging. Out of the five species tested, successful transformation, as indicated by stable growth of transformants on a high concentration of antibiotic selective growth medium and diagnostic PCR, was achieved only with P. cactorum and P. ramorum. However, while transformations in P. cactorum were consistent and stable, transformations in P. ramorum were highly variable and yielded transformants with very weak mycelial growth and abnormal morphology. Our results indicate that P. cactorum is the best candidate to move forward with CRISPR-Cas9 protocol development and provide insight for future optimization of plasmid transformations in forest Phytophthoras.

摘要

质粒介导的 DNA 转化是一种基础的分子技术,也是大多数 CRISPR-Cas9 基因编辑系统的基础。虽然许多农业疫霉菌的质粒转化已经得到很好的建立,但森林疫霉菌的这种技术发展却缺乏。鉴于我们的长期研究目标是在一种森林病原性疫霉菌中开发 CRISPR-Cas9 基因编辑,我们试图在五个物种中建立聚乙二醇(PEG)介导的质粒转化的功能:可可球二孢菌、肉桂疫霉、隐匿疫霉、葡萄座腔菌和丁香假单胞菌。我们使用农业病原体大豆疫霉菌作为转化对照,该物种的 PEG 介导转化已经得到很好的建立。使用先前针对大豆疫霉菌优化的方案,我们用三种不同的质粒在五个森林疫霉菌中进行了转化测试:两个用于 CRISPR-Cas9 基因编辑,一个用于荧光蛋白标记。在所测试的五个物种中,只有可可球二孢菌和葡萄座腔菌成功转化,这表现为在高浓度抗生素选择生长培养基上稳定生长的转化体和诊断性 PCR。然而,虽然可可球二孢菌的转化是一致且稳定的,但葡萄座腔菌的转化则高度可变,转化体的菌丝生长非常弱,形态异常。我们的结果表明,可可球二孢菌是最适合继续开发 CRISPR-Cas9 协议的候选者,并为未来在森林疫霉菌中优化质粒转化提供了思路。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/e466/11386421/4c02af1843c3/pone.0306158.g001.jpg

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