Liang Yaomin, Ji Ding, Ying Xiaoling, Ma Renqiang, Ji Weidong
Center for Translational Medicine, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou, Guangdong 510080, PR China.
Department of Otolaryngology-Head & Neck Surgery, The First Affiliated Hospital, Sun Yat-sen University, Guangzhou 510220, PR China.
J Adv Res. 2024 Sep 10. doi: 10.1016/j.jare.2024.09.010.
Transfer RNA (tRNA)-derived small RNA (tsRNA) represents an important and increasingly valued type of small non-coding RNA (sncRNA). The investigation of tRNA and tsRNA modification crosswalks has not only provided novel insights into the information and functions of tsRNA, but has also expanded the diversity and complexity of the tsRNA biological regulation network.
Comparing with other sncRNAs, tsRNA biogenesis show obvious correlation with RNA modifications from mature tRNA and harbor various tRNA modifications. In this review, we aim to present the current aspect of tsRNA modifications and that modified tsRNA shape different regulatory mechanisms in physiological and pathological processes.
Strategies for studying tsRNA mechanisms include its specific generation and functional effects induced by sequence/RNA modification/secondary structure. tsRNAs could harbor more than one tRNA modifications such as 5-methylcytosine (mC), N1-methyladenosine (mA), pseudouridine (Ψ) and N7-methylguanosine (mG). This review consolidates the current knowledge of tRNA modification regulating tsRNA biogenesis, outlines the functional roles of various modified tsRNA and highlights their specific contributions in various disease pathogenesis. Therefore, the improvement of tsRNA modification detection technology and the introduction of experimental methods of tsRNA modification are conducive to further broadening the understanding of tsRNA function at the level of RNA modification.
转运RNA(tRNA)衍生的小RNA(tsRNA)是一种重要且越来越受重视的小非编码RNA(sncRNA)类型。对tRNA和tsRNA修饰交叉途径的研究不仅为tsRNA的信息和功能提供了新的见解,还扩展了tsRNA生物调控网络的多样性和复杂性。
与其他sncRNA相比,tsRNA的生物发生与成熟tRNA的RNA修饰有明显相关性,并具有多种tRNA修饰。在本综述中,我们旨在介绍tsRNA修饰的现状以及修饰后的tsRNA在生理和病理过程中形成不同的调控机制。
研究tsRNA机制的策略包括其特定的产生以及由序列/RNA修饰/二级结构诱导的功能效应。tsRNAs可能含有不止一种tRNA修饰,如5-甲基胞嘧啶(mC)、N1-甲基腺苷(mA)、假尿苷(Ψ)和N7-甲基鸟苷(mG)。本综述整合了tRNA修饰调控tsRNA生物发生的现有知识,概述了各种修饰后的tsRNA的功能作用,并强调了它们在各种疾病发病机制中的具体贡献。因此,改进tsRNA修饰检测技术并引入tsRNA修饰的实验方法有助于在RNA修饰水平上进一步拓宽对tsRNA功能的理解。