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PNO1的泛癌研究:一种与免疫浸润相关的前瞻性预后生物标志物。

Pan-cancer exploration of PNO1: A prospective prognostic biomarker with ties to immune infiltration.

作者信息

Qin Yinhui, Li Zhen, Zhang Xianwei, Li Junjun, Teng Yuetai, Zhang Na, Zhao Shengyu, Kong Lingfei, Niu Weihong

机构信息

Department of Pharmacy, Henan Provincial People's Hospital, Zhengzhou University People's Hospital, Henan University People's Hospital, Zhengzhou, 450003, Henan, China.

Department of Pathology, Henan Key Laboratory for Digital Pathology Medicine, Henan Provincial People's Hospital, Zhengzhou University People's Hospital, Henan University People's Hospital, Zhengzhou, 450003, Henan, China.

出版信息

Heliyon. 2024 Aug 23;10(17):e36819. doi: 10.1016/j.heliyon.2024.e36819. eCollection 2024 Sep 15.

Abstract

The partner of NOB1 homolog (PNO1) is an RNA-binding protein that participates in ribosome biogenesis and protein modification. The functions of this molecule are largely unknown in cancers, particularly breast cancer. We employed bioinformatics methods to probe the putative oncogenic functions of PNO1 based on expression profiles and clinical data from the cancer genome atlas (TCGA), genotype-tissue expression project (GTEx), human protein atlas (HPA), cancer cell line encyclopedia (CCLE), UALCAN, drug sensitivity in cancer (GDSC) and UCSC XENA databases. Our analyses revealed that PNO1 was overexpressed in 31 malignancies, which excluded kidney chromophobe (KICH) and acute myeloid leukemia (LAML). Prognostic assessments have demonstrated that high PNO1 expression was significantly correlated with poor overall and disease-specific survival in various cancers. The promoter methylation level of PNO1 is significantly decreased in breast invasive carcinoma (BRCA), head and neck squamous cell carcinoma (HNSC), kidney renal papillary cell carcinoma (KIRP), prostate adenocarcinoma (PRAD), thyroid carcinoma (THCA) and uterine corpus endometrial carcinoma (UCEC). Furthermore, inhibition of PNO1 decreased the viability, migration and invasion of breast cancer cells, and these results were confirmed by mouse xenograft models of breast cancer. In addition, we discovered that tumor microenvironment (TME), immune infiltration, and chemotherapy sensitivity were influenced by PNO1 expression. Concordantly, our analyses revealed a significant positive correlation between PNO1 and programmed cell death ligand 1 (PD-L1) expression across breast carcinoma samples. In conclusion, these findings indicate that PNO1 could act as a promising prognostic biomarker and adjunct diagnostic indicator, because it affects tumor growth and invasion. Our study offers valuable new perspectives on the oncogenic role of PNO1 in various types of cancers.

摘要

NOB1 同源物伴侣(PNO1)是一种 RNA 结合蛋白,参与核糖体生物发生和蛋白质修饰。该分子在癌症尤其是乳腺癌中的功能在很大程度上尚不清楚。我们运用生物信息学方法,基于来自癌症基因组图谱(TCGA)、基因型-组织表达项目(GTEx)、人类蛋白质图谱(HPA)、癌细胞系百科全书(CCLE)、UALCAN、癌症药物敏感性(GDSC)和 UCSC XENA 数据库的表达谱和临床数据,探究 PNO1 的潜在致癌功能。我们的分析显示,PNO1 在 31 种恶性肿瘤中过表达,其中不包括肾嫌色细胞癌(KICH)和急性髓细胞白血病(LAML)。预后评估表明,PNO1 高表达与多种癌症的总体生存率和疾病特异性生存率差显著相关。在乳腺浸润性癌(BRCA)、头颈部鳞状细胞癌(HNSC)、肾肾乳头状细胞癌(KIRP)、前列腺腺癌(PRAD)、甲状腺癌(THCA)和子宫内膜癌(UCEC)中,PNO1 的启动子甲基化水平显著降低。此外,抑制 PNO1 可降低乳腺癌细胞的活力、迁移和侵袭能力,这些结果在乳腺癌小鼠异种移植模型中得到证实。此外,我们发现肿瘤微环境(TME)、免疫浸润和化疗敏感性受 PNO1 表达的影响。一致地,我们的分析显示在乳腺癌样本中,PNO1 与程序性细胞死亡配体 1(PD-L1)表达之间存在显著正相关。总之,这些发现表明,PNO1 可能是一种有前景的预后生物标志物和辅助诊断指标,因为它影响肿瘤生长和侵袭。我们的研究为 PNO1 在各种类型癌症中的致癌作用提供了有价值的新观点。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/0dc9/11387552/0d8e456c01cf/gr1.jpg

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