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HNRNPA2B1 对人类癌症预后和免疫微环境的潜在影响。

The Potential Impact of HNRNPA2B1 on Human Cancers Prognosis and Immune Microenvironment.

机构信息

Department of Neurosurgery Tangdu Hospital Fourth Military Medical University, Xi'an, China.

出版信息

J Immunol Res. 2024 Sep 5;2024:5515307. doi: 10.1155/2024/5515307. eCollection 2024.

Abstract

HNRNPA2B1 is a member of the HNRNP family, which is associated with telomere function, mRNA translation, and splicing, and plays an important role in tumor development. To date, there have been no pan-cancer studies of HNRNPA2B1, particularly within the TME. Therefore, we conducted a pan-cancer analysis of HNRNPA2B1 using TCGA data. Based on datasets from TCGA, TARGET, Genotype-Tissue Expression, and Human Protein Atlas, we employed a range of bioinformatics approaches to explore the potential oncogenic role of HNRNPA2B1. This included analyzing the association of HNRNPA2B1 expression with prognosis, tumor mutation burden (TMB), microsatellite instability (MSI), immune response, and immune cell infiltration of individual tumors. We further validated the bioinformatic findings using immunohistochemistry techniques. HNRNPA2B1 was found to be differentially expressed across most tumor types in TCGA's pan-cancer database and was predictive of poorer clinical staging and survival status. HNRNPA2B1 expression was also closely linked to TMB, MSI, tumor stemness, and chemotherapy response. HNRNPA2B1 plays a significant role in the TME and is involved in the regulation of novel immunotherapies. Its expression is significantly associated with the infiltration of macrophages, dendritic cells, NK cells, and T cells. Furthermore, HNRNPA2B1 is closely associated with immune checkpoints, immune-stimulatory genes, immune-inhibitory genes, MHC genes, chemokines, and chemokine receptors. We performed a comprehensive evaluation of HNRNPA2B1, revealing its potential role as a prognostic indicator for patients and its immunomodulatory functions.

摘要

HNRNPA2B1 是 HNRNP 家族的成员,与端粒功能、mRNA 翻译和剪接有关,在肿瘤发生发展中发挥着重要作用。迄今为止,尚无 HNRNPA2B1 的泛癌研究,特别是在 TME 中。因此,我们使用 TCGA 数据对 HNRNPA2B1 进行了泛癌分析。基于 TCGA、TARGET、Genotype-Tissue Expression 和 Human Protein Atlas 中的数据集,我们采用了一系列生物信息学方法来探索 HNRNPA2B1 的潜在致癌作用。这包括分析 HNRNPA2B1 表达与预后、肿瘤突变负担 (TMB)、微卫星不稳定性 (MSI)、免疫反应和个体肿瘤免疫细胞浸润的相关性。我们进一步使用免疫组织化学技术验证了生物信息学发现。在 TCGA 的泛癌症数据库中,HNRNPA2B1 在大多数肿瘤类型中均有差异表达,并且预测了较差的临床分期和生存状况。HNRNPA2B1 的表达也与 TMB、MSI、肿瘤干性和化疗反应密切相关。HNRNPA2B1 在 TME 中发挥着重要作用,并参与调节新型免疫疗法。它的表达与巨噬细胞、树突状细胞、NK 细胞和 T 细胞的浸润显著相关。此外,HNRNPA2B1 与免疫检查点、免疫刺激性基因、免疫抑制性基因、MHC 基因、趋化因子和趋化因子受体密切相关。我们对 HNRNPA2B1 进行了全面评估,揭示了其作为患者预后指标的潜在作用及其免疫调节功能。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/f587/11392580/10ee5c631aea/JIR2024-5515307.001.jpg

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