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Tenascins 的演化。

The evolution of tenascins.

机构信息

School of Biochemistry, University of Bristol, Bristol, BS8 1TD, UK.

Department of Cell Biology and Human Anatomy, University of California, Davis, CA, 95616, USA.

出版信息

BMC Ecol Evol. 2024 Sep 14;24(1):121. doi: 10.1186/s12862-024-02306-2.

Abstract

BACKGROUND

The evolution of extracellular matrix is tightly linked to the evolution of organogenesis in metazoans. Tenascins are extracellular matrix glycoproteins of chordates that participate in integrin-signaling and morphogenetic events. Single tenascins are encoded by invertebrate chordates, and multiple tenascin paralogs are found in vertebrates (designated tenascin-C, tenascin-R, tenascin-W and tenascin-X) yet, overall, the evolution of this family has remained unclear.

RESULTS

This study examines the genomes of hemichordates, cephalochordates, tunicates, agnathans, cartilaginous fishes, lobe-finned fishes, ray-finned fishes and representative tetrapods to identify predicted tenascin proteins. We comprehensively assess their evolutionary relationships by sequence conservation, molecular phylogeny and examination of conservation of synteny of the encoding genes. The resulting new evolutionary model posits the origin of tenascin in an ancestral chordate, with tenascin-C-like and tenascin-R-like paralogs emerging after a whole genome duplication event in an ancestral vertebrate. Tenascin-X appeared following a second round of whole genome duplication in an ancestral gnathostome, most likely from duplication of the gene encoding the tenascin-R homolog. The fourth gene, encoding tenascin-W (also known as tenascin-N), apparently arose from a local duplication of tenascin-R.

CONCLUSIONS

The diversity of tenascin paralogs observed in agnathans and gnathostomes has evolved through selective retention of novel genes that arose from a combination of whole genome and local duplication events. The evolutionary appearance of specific tenascin paralogs coincides with the appearance of vertebrate-specific cell and tissue types where the paralogs are abundantly expressed, such as the endocranium and facial skeleton (tenascin-C), an expanded central nervous system (tenascin-R), and bone (tenascin-W).

摘要

背景

细胞外基质的进化与后生动物器官发生的进化密切相关。Tenascins 是脊索动物细胞外基质糖蛋白,参与整合素信号和形态发生事件。无脊椎脊索动物编码单一的 tenascin,而脊椎动物则发现多种 tenascin 基因(命名为 tenascin-C、tenascin-R、tenascin-W 和 tenascin-X),但该家族的总体进化仍不清楚。

结果

本研究检查了半索动物、头索动物、被囊动物、无颌类、软骨鱼类、肺鱼、硬骨鱼类和代表性四足动物的基因组,以鉴定预测的 tenascin 蛋白。我们通过序列保守性、分子系统发育和编码基因的同线性保守性来全面评估它们的进化关系。由此产生的新进化模型表明 tenascin 起源于祖先脊索动物,在祖先脊椎动物的全基因组复制事件后出现 tenascin-C 样和 tenascin-R 样基因。在祖先有颌类的第二轮全基因组复制后出现了 tenascin-X,最有可能来自 tenascin-R 同源基因的复制。第四个基因,编码 tenascin-W(也称为 tenascin-N),显然是从 tenascin-R 的局部复制产生的。

结论

无颌类和有颌类观察到的 tenascin 基因多样性是通过选择性保留新基因进化而来的,这些新基因是由全基因组和局部复制事件的组合产生的。特定 tenascin 基因的出现与脊椎动物特有的细胞和组织类型的出现相吻合,这些基因在这些组织中大量表达,如内颅和面部骨骼(tenascin-C)、扩展的中枢神经系统(tenascin-R)和骨骼(tenascin-W)。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/9d0e/11401434/c1070828dcf6/12862_2024_2306_Fig1_HTML.jpg

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