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鉴定和功能表征刚地弓形虫中的 NcAP2XII-4。

Identification and function characterization of NcAP2XII-4 in Neospora caninum.

机构信息

Ministry of Education Key Laboratory of Molecular and Cellular Biology, College of Life Sciences, Hebei Normal University, Shijiazhuang, 050024, Hebei, China.

Hebei Collaborative Innovation Center for Eco-Environment, Shijiazhuang, Hebei, China.

出版信息

Parasit Vectors. 2024 Sep 14;17(1):392. doi: 10.1186/s13071-024-06477-1.

Abstract

BACKGROUND

Neospora caninum is a protozoan parasite in the Apicomplexa controlled by complex signaling pathways. Transcriptional control, an important way to regulate gene expression, has been almost absent in the N. caninum life process. However, to date, research on the transcriptional regulation of the AP2 family factors in N. caninum has been extremely limited. A prior study demonstrated that removing rhoptry protein 5 (ROP5), a significant virulence factor, resulted in abnormal expression levels of predicted NcAP2XII-4 in N. caninum, suggesting that the factor may regulate the function of ROP5. This study aimed to identify NcAP2XII-4 and its function in transcriptional regulation.

METHODS

The NcAP2XII-4 gene was identified by analyzing the N. caninum genome. A polyclonal antibody against the protein was prepared and purified, and its expression and localization in the parasite were detected using western blot (WB) and immunofluorescence assay (IFA). The ΔNcAP2XII-4 strain was constructed from the Nc1 strain using CRISPR/Cas9 to study its effect on the growth and development of N. caninum, and DAP-Seq and electrophoretic mobility shift assay (EMSA) were used to verify the transcriptional regulatory functions of the gene.

RESULTS

Bioinformatic analysis showed that NcAP2XII-4 consists of 11,976 bp and encodes 3991 amino acids, with a predicted molecular mass of 410 kDa. The protein has two AP2 domains, 1207aa-1251aa and 3453aa-3500aa, and is predicted to be located in the nucleus. The results of PCR, WB, and IFA were in accordance with the bioinformatics analysis. ΔNcAP2XII-4 was successfully constructed, but the strain could not be released and ultimately succumbed within parasitophorous vacuoles (PVs). Plaque assays demonstrated that parasites lacking this gene could not form plaques. One motif was successfully identified using DAP-Seq technique. Two prokaryotic expression vectors containing the AP2 domain of NcAP2XII-4 were successfully constructed, and two prokaryotic expression proteins, AP2-D1 and AP2-D2, and ROP5 biotinylated probes were prepared. Using EMSA, NcAP2XII-4 was shown to regulate ROP5 transcription by binding to its promoter.

CONCLUSIONS

NcAP2XII-4 is an essential gene in N. caninum. This study provides a foundation for further research on transcriptional regulation in N. caninum and identifies a new candidate factor for the development of vaccines against N. caninum.

摘要

背景

刚地弓形虫是顶复门的一种原虫寄生虫,其受到复杂的信号通路的控制。转录调控是调节基因表达的重要方式,在刚地弓形虫的生命过程中几乎不存在。然而,迄今为止,对刚地弓形虫 AP2 家族因子的转录调控研究极为有限。先前的研究表明,去除主要毒力因子 rhoptry 蛋白 5(ROP5)会导致刚地弓形虫中预测的 NcAP2XII-4 的异常表达水平,这表明该因子可能调节 ROP5 的功能。本研究旨在鉴定 NcAP2XII-4 及其在转录调控中的功能。

方法

通过分析刚地弓形虫基因组鉴定 NcAP2XII-4 基因。制备并纯化针对该蛋白的多克隆抗体,并用 Western blot(WB)和免疫荧光分析(IFA)检测其在寄生虫中的表达和定位。使用 CRISPR/Cas9 从 Nc1 株构建 ΔNcAP2XII-4 株,研究其对刚地弓形虫生长发育的影响,并用 DAP-Seq 和电泳迁移率变动分析(EMSA)验证该基因的转录调控功能。

结果

生物信息学分析表明,NcAP2XII-4 由 11976bp 组成,编码 3991 个氨基酸,预测分子量为 410kDa。该蛋白含有两个 AP2 结构域,1207aa-1251aa 和 3453aa-3500aa,预测位于细胞核内。PCR、WB 和 IFA 的结果与生物信息学分析一致。成功构建了 ΔNcAP2XII-4,但该菌株无法释放,最终在胞质空泡(PVs)内死亡。空斑试验表明,缺乏该基因的寄生虫无法形成空斑。DAP-Seq 技术成功鉴定出一个基序。成功构建了含有 NcAP2XII-4 的 AP2 结构域的两个原核表达载体,并制备了两个原核表达蛋白 AP2-D1 和 AP2-D2 以及 ROP5 生物素化探针。通过 EMSA 显示,NcAP2XII-4 通过结合其启动子来调节 ROP5 的转录。

结论

NcAP2XII-4 是刚地弓形虫的必需基因。本研究为进一步研究刚地弓形虫的转录调控提供了基础,并确定了刚地弓形虫疫苗开发的一个新候选因子。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/1721/11402202/9ecc3c4a32f8/13071_2024_6477_Fig1_HTML.jpg

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