基于递归图从单细胞 Hi-C 数据重建 3D 染色体结构。
Reconstruction of 3D Chromosome Structure from Single-Cell Hi-C Data via Recurrence Plots.
机构信息
Institute of Systems and Information Engineering, University of Tsukuba, Tsukuba, Japan.
International Research Center for Neurointelligence (WPI-IRCN), The University of Tokyo, Tokyo, Japan.
出版信息
Methods Mol Biol. 2025;2856:263-268. doi: 10.1007/978-1-0716-4136-1_15.
PMID:39283457
Abstract
We describe an approach for reconstructing three-dimensional (3D) structures from single-cell Hi-C data. This approach has been inspired by a method of recurrence plots and visualization tools for nonlinear time series data. Some examples are also presented.
摘要
我们描述了一种从单细胞 Hi-C 数据重建三维（3D）结构的方法。这种方法的灵感来自于一种用于非线性时间序列数据的递归图和可视化工具的方法。也给出了一些例子。
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