Department of Pharmacy, Laboratory of Pharmaceutical Analytical Chemistry, CIRM, Liège, Belgium 4000.
Laboratory for the Analysis of Medicines, CIRM, Liège, Belgium 4000.
J Chem Inf Model. 2024 Oct 14;64(19):7447-7456. doi: 10.1021/acs.jcim.4c00608. Epub 2024 Sep 16.
QSRR is a valuable technique for the retention time predictions of small molecules. This aims to bridge the gap between molecular structure and chromatographic behavior, offering invaluable insights for analytical chemistry. Given the challenge of simultaneous target prediction with variable experimental conditions and the scarcity of comprehensive data sets for such predictive modelings in chromatography, this study introduces a transfer learning-based multitarget QSRR approach to enhance retention time prediction. Through a comparative study of four models, both with and without the transfer learning approach, the performance of both single and multitarget QSRR was evaluated based on Mean Squared Error (MSE) and metrics. Individual models were also tested for their performance against benchmark studies in this field. The findings suggest that transfer learning based multitarget models exhibit potential for enhanced accuracy in predicting retention times of small molecules, presenting a promising avenue for QSRR modeling. These models will be highly beneficial for optimizing experimental conditions in method development by better retention time predictions in Reversed-Phase Liquid Chromatography (RPLC). The reliable and effective predictive capabilities of these models make them valuable tools for pharmaceutical research and development endeavors.
QSRR 是一种非常有价值的小分子保留时间预测技术。它旨在弥合分子结构和色谱行为之间的差距,为分析化学提供了宝贵的见解。鉴于在色谱中同时进行具有可变实验条件的目标预测以及此类预测模型全面数据集稀缺的挑战,本研究引入了基于迁移学习的多目标 QSRR 方法,以增强保留时间预测。通过对四个模型(有和没有迁移学习方法)的比较研究,基于均方误差(MSE)和 R2 指标评估了单目标和多目标 QSRR 的性能。还针对该领域的基准研究测试了各个模型的性能。研究结果表明,基于迁移学习的多目标模型在预测小分子保留时间方面具有提高准确性的潜力,为 QSRR 建模提供了一个有前途的途径。这些模型将通过更好地预测反相液相色谱(RPLC)中的保留时间,对优化方法开发中的实验条件非常有益。这些模型的可靠和有效的预测能力使它们成为药物研究和开发工作的有价值的工具。