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一个全球蓝莓系统发育: Vaccinieae(杜鹃花科)的进化、多样化和生物地理学。

A global blueberry phylogeny: Evolution, diversification, and biogeography of Vaccinieae (Ericaceae).

机构信息

Florida Museum of Natural History, University of Florida, Gainesville, FL, USA; Department of Biology, University of Florida, Gainesville, FL, USA.

Florida Museum of Natural History, University of Florida, Gainesville, FL, USA; Duke University, Durham, NC, USA.

出版信息

Mol Phylogenet Evol. 2024 Dec;201:108202. doi: 10.1016/j.ympev.2024.108202. Epub 2024 Sep 15.

DOI:10.1016/j.ympev.2024.108202
PMID:39288897
Abstract

Vaccinieae is a morphologically diverse and species-rich (∼1430 species) tribe in Ericaceae. Although the majority of diversity is tropical, Vaccinieae are best known for temperate crops (i.e., blueberries, cranberries, and lingonberries) in Vaccinium. Vaccinium itself (∼500 species) has been previously suggested as highly polyphyletic and taxonomic boundaries among many of the other genera in the tribe remain uncertain. We assessed the evolutionary history of Vaccinieae with phylogenomic analyses based on a target-enrichment dataset containing 256 low-copy nuclear loci and 210 species representing 30 of the 35 genera in the tribe and 25 of the 29 sections of Vaccinium. We conducted time-calibrated biogeographic analyses and diversification analyses to explore the area of origin and global dispersal history of the tribe. The analysis recovered a temperate North American origin for Vaccinieae approximately 30 million years ago. Tropical diversity of Vaccinieae was inferred to result from multiple, independent movements into the tropics from north-temperate ancestors. Diversification rate increases corresponded to radiation into the Andes and SE Asia. The pseudo-10-locular ovary evolved once in the tribe from the five-locular state, coinciding with the diversification of a major clade that includes most Asian Vaccinium and the group from which commercial blueberries are derived (V. sect. Cyanococcus). A reconstruction from available chromosome counts suggests that a major polyploid event predated the evolution of nearly half the diversity of Vaccinieae. The extent of polyphyly in Vaccinium documented here supports the need for a generic reclassification of the tribe.

摘要

Vaccinieae 是一个形态多样、物种丰富(约 1430 种)的 Ericaceae 族。虽然大多数多样性是热带的,但 Vaccinieae 以 Vaccinium 中的温带作物(如蓝莓、蔓越莓和越橘)而闻名。Vaccinium 本身(约 500 种)以前被认为是高度多系的,而且该族中许多其他属的分类边界仍然不确定。我们使用基于目标富集数据集的系统基因组分析来评估 Vaccinieae 的进化历史,该数据集包含 256 个低拷贝核基因座和 210 个代表该族 35 个属中的 30 个和 Vaccinium 29 个节中的 25 个的物种。我们进行了时间校准的生物地理分析和多样化分析,以探索该族的起源区和全球扩散历史。分析结果表明,Vaccinieae 约在 3000 万年前起源于温带北美。热带 Vaccinieae 的多样性被推断为源自北温带祖先的多次独立向热带的迁徙。多样化率的增加与安第斯山脉和东南亚的辐射相对应。假 10 室子房在该族中从 5 室状态进化而来,这与一个主要分支的多样化相一致,该分支包括大多数亚洲 Vaccinium 和商业蓝莓的起源(V. sect. Cyanococcus)。从现有染色体计数的重建表明,在 Vaccinieae 近一半多样性的进化之前,发生了一次主要的多倍体事件。Vaccinium 中记录的多系程度支持对该族进行通用分类重分类的需要。

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