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研究果园中长期狗尾草覆盖对梨树农艺性状的根际微生物群、土壤代谢产物及碳氮动态的影响。

Investigating the impact of long-term bristlegrass coverage on rhizosphere microbiota, soil metabolites, and carbon-nitrogen dynamics for pear agronomic traits in orchards.

作者信息

Shi Chunhui, Wang Xiaoqing, Jiang Shuang, Xu Jianfeng, Luo Jun

机构信息

Forest & Fruit Tree Research Institute, Shanghai Academy of Agriculture Sciences, Shanghai, China.

Shanghai Key Laboratory of Facility Horticulture Technology, Shanghai Academy of Agriculture Sciences, Shanghai, China.

出版信息

Front Microbiol. 2024 Sep 5;15:1461254. doi: 10.3389/fmicb.2024.1461254. eCollection 2024.

Abstract

BACKGROUND

Grass coverage (GC) under no-tillage systems in orchards signifcantly infuences underground carbon (C) and nitrogen (N) sequestration, primarily through promoting mineral nutrient utilization by rhizospheric microorganisms. However, the comprehensive impact of GC on microbial communities and plant responses using soil metabolomics remains inadequately recognized.

METHODS

We investigated two rhizosphere types established since 2002: bristlegrass ( (L.) P. Beauv.) coverage (SC) and clean cultivation (CC) to assess their efects on soil parameters, enzyme activities, and key pear agronomic traits, including yield (single fruit weight (SFW)) and qualities (soluble solids content (SSC), and total soluble sugar (TSS)). We combined microbiological analysis (16S rRNA sequencing) and non-targeted metabolomics (UPLC-MS/MS and GC-MS) to explore how microbial communities infuence fruit agronomic traits and soil nutrient dynamics in pear orchards under SC conditions.

RESULTS

Our fndings indicate that SC signifcantly enhances soil organic carbon (SOC), soil organic nitrogen (SON), the C:N ratio, and available nitrogen (AN). Moreover, SC leads to pronounced increases in soil enzyme activities involved in the C cycle and storage, including soil sucrase, β-glucosidase, polyphenol oxidase and cellulase. Microbiome analysis revealed substantial diferences in microbial community composition and diversity indices between SC and CC rhizosphere soils within the 0-40 cm depth. Metabolomic analysis demonstrated significant alterations in metabolite profiles across both the 0-20 cm and 20-40 cm layers under SC conditions. The identifed metabolites primarily involve sugar and amino acid-related metabolic pathways, refecting perturbations in C and N metabolism consistent with shifts in bacterial community structure. Several plant growth-promoting rhizobacteria (PGPRs) taxa (e.g., , , , , , , , and ) were enriched under SC, associated with metabolites such as sucrose, N-acetyl-D-glucosamine, N-acetyl-L-glutamic acid, rhamnose, UDP-GlcNAc and D-maltose. These fndings suggest their roles in promoting C and N sequestration processes through sucrose synthesis and glycolytic pathways in the soil, which was signifcantly correlated with the formation of agronomic traits such as fruit yield, SFW SSC and TSS (p<0.05), and SC treatments signifcantly increased yields by 35.40-62.72% and sucrose content in TSS by 2.43-3.96 times than CC treatments.

CONCLUSION

This study provides valuable insights into the efects of SC on soil microbial communities and plant physiology, enhancing our understanding of their implications for sustainable orchard management.

摘要

背景

果园免耕系统下的草覆盖度(GC)对地下碳(C)和氮(N)固存具有显著影响,主要是通过促进根际微生物对矿质养分的利用。然而,利用土壤代谢组学全面认识GC对微生物群落和植物反应的影响仍显不足。

方法

我们调查了自2002年以来建立的两种根际类型:狗尾草(Setaria viridis (L.) P. Beauv.)覆盖(SC)和清耕(CC),以评估它们对土壤参数、酶活性以及梨的关键农艺性状的影响,这些性状包括产量(单果重(SFW))和品质(可溶性固形物含量(SSC)以及总可溶性糖(TSS))。我们结合微生物学分析(16S rRNA测序)和非靶向代谢组学(超高效液相色谱 - 质谱联用(UPLC - MS/MS)和气相色谱 - 质谱联用(GC - MS)),以探究在SC条件下微生物群落如何影响梨园中的果实农艺性状和土壤养分动态。

结果

我们的研究结果表明,SC显著提高了土壤有机碳(SOC)、土壤有机氮(SON)、碳氮比以及有效氮(AN)。此外,SC导致参与碳循环和储存的土壤酶活性显著增加,包括土壤蔗糖酶、β - 葡萄糖苷酶、多酚氧化酶和纤维素酶。微生物群落分析显示,在0 - 40厘米深度内,SC和CC根际土壤之间的微生物群落组成和多样性指数存在显著差异。代谢组学分析表明,在SC条件下,0 - 20厘米和20 - 40厘米土层的代谢物谱均发生了显著变化。鉴定出的代谢物主要涉及糖和氨基酸相关的代谢途径,反映了与细菌群落结构变化一致的碳和氮代谢扰动。在SC条件下,几种促植物生长根际细菌(PGPRs)类群(例如,伯克氏菌属(Burkholderia)、鞘氨醇单胞菌属(Sphingomonas)、假单胞菌属(Pseudomonas)、芽孢杆菌属(Bacillus)、贪铜菌属(Cupriavidus)、甲基杆菌属(Methylobacterium)、产碱菌属(Alcaligenes)和不动杆菌属(Acinetobacter))富集,与蔗糖、N - 乙酰 - D - 葡萄糖胺、N - 乙酰 - L - 谷氨酸、鼠李糖、尿苷二磷酸 - N - 乙酰葡糖胺(UDP - GlcNAc)和D - 麦芽糖等代谢物相关。这些结果表明它们通过土壤中的蔗糖合成和糖酵解途径在促进碳和氮固存过程中发挥作用,这与果实产量、单果重、可溶性固形物含量和总可溶性糖等农艺性状的形成显著相关(p < 0.05),并且SC处理的产量比CC处理显著提高了35.40 - 62.72%,总可溶性糖中的蔗糖含量比CC处理提高了2.43 - 3.96倍。

结论

本研究为SC对土壤微生物群落和植物生理学的影响提供了有价值的见解,增进了我们对其在可持续果园管理中的意义的理解。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/43ad/11411186/44650e2a6c69/fmicb-15-1461254-g001.jpg

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