Departamento de Biología, Facultad de Química, Universidad Nacional Autónoma de México (U.N.A.M.), Ciudad de México 04510, Mexico.
Laboratorio de Bioprocesos Ambientales, Universidad Politécnica de Pachuca (U.P.P.), Zempoala, Pachuca 43830, Mexico.
Int J Mol Sci. 2024 Sep 10;25(18):9770. doi: 10.3390/ijms25189770.
The transmembrane nitrate reductase (Nar) is the first enzyme in the dissimilatory alternate anaerobic nitrate respiratory chain in denitrifying bacteria. To date, there has been no real-time method to determine its specific activity embedded in its native membrane; here, we describe such a new method, which is useful with the inside-out membranes of and other denitrifying bacteria. This new method takes advantage of the native coupling of the endogenous NADH dehydrogenase or Complex I with the reduction of nitrate by Nar through the quinone pool of the inner membranes of . This is achieved under previously reached conditions. Inner controls confirming the specific Nar activity determined by this new method were made by the total inhibition of the Nar enzyme by sodium azide and cyanide, well-known Nar inhibitors. The estimation of the Michaelis-Menten affinity of Nar for NO using this so-called Nar-JJ assay gave a of 70.4 μM, similar to previously determined values. This new Nar-JJ assay is a suitable, low-cost, and reproducible method to determine in real-time the endogenous Nar activity not only in , but in other denitrifying bacteria such as , and potentially in other entero-pathogenic bacteria.
跨膜硝酸盐还原酶(Nar)是反硝化细菌中异化型缺氧硝酸盐呼吸链中的第一个酶。迄今为止,还没有一种真正的方法可以在其天然膜中嵌入来测定其特定的活性;在这里,我们描述了一种新的方法,该方法适用于 和其他反硝化细菌的向外膜。这种新方法利用了内源性 NADH 脱氢酶或复合物 I 与 Nar 通过 内膜中的醌库还原硝酸盐的天然偶联。这是在先前达到的条件下实现的。通过使用众所周知的 Nar 抑制剂叠氮化钠和氰化物完全抑制 Nar 酶,对内控制证实了该新方法测定的特定 Nar 活性。使用这种所谓的 Nar-JJ 测定法估算 Nar 对 NO 的米氏常数,得到的 为 70.4 μM,与先前确定的值相似。这种新的 Nar-JJ 测定法是一种合适的、低成本的、可重复的方法,可以实时测定内源 Nar 活性,不仅在 中,而且在其他反硝化细菌如 中,并且可能在其他肠道致病性细菌中。