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整合 miRNA 和 mRNA 转录组分析揭示了冬小麦应对干旱胁迫响应的调控机制。

Integrated miRNA and mRNA Transcriptome Analysis Reveals Regulatory Mechanisms in the Response of Winter to Drought Stress.

机构信息

State Key Laboratory of Aridland Crop Science, College of Agronomy, Gansu Agricultural University, Lanzhou 730070, China.

出版信息

Int J Mol Sci. 2024 Sep 20;25(18):10098. doi: 10.3390/ijms251810098.

Abstract

Drought is a major abiotic stress factor that reduces agricultural productivity. Understanding the molecular regulatory network of drought response in winter rape is of great significance for molecular . In order to comprehensively analyze the network expression of DEGs and DEMIs in winter rape under drought stress, in this study we used Longyou 7 as the experimental material to identify DEGs and DEMIs related to drought stress by transcriptome and miRNA sequencing. A total of 14-15 key differential mRNA genes related to drought stress and biological stress were screened out under different treatments in the three groups. and 32 differential miRNAs were identified through targeted regulatory relationships, and the mRNA expression of 20 target genes was negatively regulated by the targeting regulatory relationship. It is mainly enriched in starch and sucrose metabolism, carbon metabolism and other pathways. Among them, gra-MIR8731-p3_2ss13GA18GA regulated the expression of multiple mRNAs in the three treatments. miRNA is mainly involved in the drought resistance of Chinese cabbage winter rape by regulating the expression of target genes, such as starch and sucrose metabolism, amino acid biosynthesis, and carbon metabolism. These miRNAs and their target genes play an indispensable role in winter rapeseed drought stress tolerance regulation.

摘要

干旱是降低农业生产力的主要非生物胁迫因素。了解冬油菜对干旱响应的分子调控网络对于分子生物学具有重要意义。为了全面分析干旱胁迫下冬油菜 DEGs 和 DEMIs 的网络表达,本研究以龙游 7 号为实验材料,通过转录组和 miRNA 测序鉴定与干旱胁迫相关的 DEGs 和 DEMIs。在三组不同处理下,共筛选出 14-15 个与干旱和生物胁迫相关的关键差异 mRNA 基因,通过靶向调控关系鉴定出 32 个差异 miRNA,其中 20 个靶基因的 mRNA 表达受靶向调控关系的负调控。它主要富集在淀粉和蔗糖代谢、碳代谢等途径中。其中,gra-MIR8731-p3_2ss13GA18GA 在三种处理中调节多个 mRNAs 的表达。miRNA 主要通过调节靶基因的表达参与白菜冬油菜的抗旱性,如淀粉和蔗糖代谢、氨基酸生物合成和碳代谢。这些 miRNA 和它们的靶基因在冬油菜干旱胁迫耐受调节中起着不可或缺的作用。

https://cdn.ncbi.nlm.nih.gov/pmc/blobs/6e95/11432419/274db4673687/ijms-25-10098-g001.jpg

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