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用于一致神经解码的少样本算法(FALCON)基准测试。

Few-shot Algorithms for Consistent Neural Decoding (FALCON) Benchmark.

作者信息

Karpowicz Brianna M, Ye Joel, Fan Chaofei, Tostado-Marcos Pablo, Rizzoglio Fabio, Washington Clay, Scodeler Thiago, de Lucena Diogo, Nason-Tomaszewski Samuel R, Mender Matthew J, Ma Xuan, Arneodo Ezequiel Matias, Hochberg Leigh R, Chestek Cynthia A, Henderson Jaimie M, Gentner Timothy Q, Gilja Vikash, Miller Lee E, Rouse Adam G, Gaunt Robert A, Collinger Jennifer L, Pandarinath Chethan

出版信息

bioRxiv. 2024 Oct 31:2024.09.15.613126. doi: 10.1101/2024.09.15.613126.

DOI:10.1101/2024.09.15.613126
PMID:39345641
原文链接:https://pmc.ncbi.nlm.nih.gov/articles/PMC11429771/
Abstract

Intracortical brain-computer interfaces (iBCIs) can restore movement and communication abilities to individuals with paralysis by decoding their intended behavior from neural activity recorded with an implanted device. While this activity yields high-performance decoding over short timescales, neural data are often nonstationary, which can lead to decoder failure if not accounted for. To maintain performance, users must frequently recalibrate decoders, which requires the arduous collection of new neural and behavioral data. Aiming to reduce this burden, several approaches have been developed that either limit recalibration data requirements (few-shot approaches) or eliminate explicit recalibration entirely (zero-shot approaches). However, progress is limited by a lack of standardized datasets and comparison metrics, causing methods to be compared in an ad hoc manner. Here we introduce the FALCON benchmark suite (Few-shot Algorithms for COnsistent Neural decoding) to standardize evaluation of iBCI robustness. FALCON curates five datasets of neural and behavioral data that span movement and communication tasks to focus on behaviors of interest to modern-day iBCIs. Each dataset includes calibration data, optional few-shot recalibration data, and private evaluation data. We implement a flexible evaluation platform which only requires user-submitted code to return behavioral predictions on unseen data. We also seed the benchmark by applying baseline methods spanning several classes of possible approaches. FALCON aims to provide rigorous selection criteria for robust iBCI decoders, easing their translation to real-world devices.

摘要

皮层内脑机接口(iBCIs)可以通过植入设备记录的神经活动来解码瘫痪患者的预期行为,从而恢复他们的运动和交流能力。虽然这种活动在短时间尺度上能实现高性能解码,但神经数据往往是非平稳的,如果不加以考虑,可能会导致解码器失效。为了维持性能,用户必须频繁地重新校准解码器,这需要费力地收集新的神经和行为数据。为了减轻这一负担,已经开发了几种方法,要么限制重新校准的数据要求(少样本方法),要么完全消除明确的重新校准(零样本方法)。然而,由于缺乏标准化的数据集和比较指标,进展受到限制,导致方法只能以临时的方式进行比较。在这里,我们引入了FALCON基准套件(用于一致神经解码的少样本算法),以规范对iBCI鲁棒性的评估。FALCON精心整理了五个神经和行为数据的数据集,这些数据集涵盖了运动和交流任务,以关注现代iBCIs感兴趣的行为。每个数据集都包括校准数据、可选的少样本重新校准数据和私人评估数据。我们实现了一个灵活的评估平台,该平台只需要用户提交的代码就能返回对未见数据的行为预测。我们还通过应用涵盖几类可能方法的基线方法为基准测试提供种子数据。FALCON旨在为鲁棒的iBCI解码器提供严格的选择标准,促进它们向实际设备的转化。