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从 RNA 到 DNA:从祖先的 RNA 依赖性 RNA 聚合酶中出现的逆转录酶。

From RNA to DNA: Emergence of reverse transcriptases from an ancestral RNA-dependent RNA polymerase.

机构信息

Laboratório de Genética Evolutiva Paulo Leminski, Departamento de Biologia Molecular, Universidade Federal da Paraíba, João Pessoa, 58051-900, Brazil; Network of Researchers on the Chemical Evolution of Life (NoRCEL), Leeds, LS7 3RB, UK.

Laboratório de Genética Evolutiva Paulo Leminski, Departamento de Biologia Molecular, Universidade Federal da Paraíba, João Pessoa, 58051-900, Brazil.

出版信息

Biosystems. 2024 Dec;246:105345. doi: 10.1016/j.biosystems.2024.105345. Epub 2024 Sep 28.

Abstract

The transition from RNA as the informational molecule of primordial biological systems to the DNA genomes of modern organisms represents one of the greatest evolutionary transitions in the history of life. One way to understand this transition is to comprehend the origin of the enzymes responsible for the metabolism of nucleic acid polymers. In the present work, we reconstructed the ancestral sequence of RNA-dependent DNA polymerase (RdDp) and modeled its structure. The data demonstrate that, in terms of primary sequence, the ancestral sequences exhibit characteristic elements of RdDp; however, structurally, they are more similar to RNA-dependent RNA polymerase (RdRp). The presented data suggest that RdDp may have originated through modifications and neofunctionalization from an RdRp-like ancestor.

摘要

从 RNA 作为原始生物系统的信息分子到现代生物的 DNA 基因组的转变,代表了生命历史上最大的进化转变之一。理解这一转变的一种方法是了解负责核酸聚合物代谢的酶的起源。在本工作中,我们重建了 RNA 依赖性 DNA 聚合酶(RdDp)的祖先序列并对其结构进行了建模。数据表明,就一级序列而言,祖先序列表现出 RdDp 的特征元件;然而,从结构上看,它们更类似于 RNA 依赖性 RNA 聚合酶(RdRp)。所提出的数据表明,RdDp 可能是通过 RdRp 样祖先的修饰和新功能化而起源的。

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